myRT

myRT report for GCA_013459015.1_ASM1345901v1

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Seq: CP053851.1 Escherichia coli strain CE1803A chromosome, complete genome (4878730 bp)
Overview 1 RT 1: 40952-45581 bp 2 RT 2: 3529226-3532033 bp Neighborhood of RT #1 [40952, 45595] DcuC RVT-GII Asparaginase_2 DUF5339 Neighborhood of RT #2 [3529226, 3532033] RAYT IS285 RVT-GII HTH_Tnp_1 Feature: gene Location: 40952-42313 bp Ori: QLK71655.1 Gene: dcuC Feature: domain Description: DcuC Location: 40955-42287 bp Feature: domain Description: DcuC Location: 40955-42287 bp Feature: gene Location: 42366-42494 bp Feature: gene Location: 42978-43424 bp Ori: QLK71656.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43284-43386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43284-43386 bp Feature: gene Location: 43948-44979 bp Ori: QLK71657.1 Feature: domain Description: Asparaginase_2 Location: 44038-44971 bp Feature: domain Description: Asparaginase_2 Location: 44038-44971 bp Feature: gene Location: 45317-45595 bp Ori: QLK71658.1 Feature: domain Description: DUF5339 Location: 45380-45581 bp Feature: domain Description: DUF5339 Location: 45380-45581 bp Feature: gene Location: 3529226-3529354 bp Feature: domain Description: RAYT Location: 3529229-3529355 bp Feature: domain Description: RAYT Location: 3529229-3529355 bp Feature: gene Location: 3529362-3530029 bp Feature: domain Description: IS285 Location: 3529392-3529770 bp Feature: domain Description: IS285 Location: 3529392-3529770 bp Feature: gene Location: 3530172-3530634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3530184-3530376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35301 84-3530376 bp Feature: gene Location: 3530889-3531138 bp Ori: QLK74673.1 Feature: domain Description: HTH_Tnp_1 Location: 3530898-3531111 bp Feature: domain Description: HTH_Tnp_1 Location: 3530898-3531 1 1 1 bp Feature: gene Location: 3531138-3532033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), DUF5339 (pfam17274), RAYT (COG1943), IS285 (COG3328), HTH_Tnp_1 (pfam01527)