myRT

myRT report for GCA_013459175.1_ASM1345917v1

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Seq: CP053852.1 Escherichia coli strain CE1628 chromosome, complete genome (5077833 bp)
Overview 1 RT 1: 1637049-1641666 bp 2 RT 2: 3099642-3101555 bp Neighborhood of RT #1 [1637049, 1641692] DUF5339 Asparaginase_2 RVT-GII RVT-GII DcuC Neighborhood of RT #2 [3099642, 3101554] HTH_Tnp_1 RVT-GII IS285 RAYT Feature: gene Location: 1637049-1637327 bp Ori: QLK77503.1 Feature: domain Description: DUF5339 Location: 1637112-1637313 bp Feature: domain Description: DUF5339 Location: 1 6371 1 2-1 63731 3 bp Feature: gene Location: 1637665-1638696 bp Ori: QLK77504.1 Feature: domain Description: Asparaginase_2 Location: 1637755-1638688 bp Feature: domain Description: Asparaginase_2 Location: 1 637755-1 638688 bp Feature: gene Location: 1639104-1639268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639107-1639263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6391 07-1 639263 bp Feature: gene Location: 1639220-1639666 bp Ori: QLK77505.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639526-1639628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 639526-1 639628 bp Feature: gene Location: 1640150-1640278 bp Feature: gene Location: 1640331-1641692 bp Ori: QLK77506.1 Gene: dcuC Feature: domain Description: DcuC Location: 1640334-1641666 bp Feature: domain Description: DcuC Location: 1 640334-1 641 666 bp Feature: gene Location: 3099642-3099891 bp Ori: QLK78784.1 Feature: domain Description: HTH_Tnp_1 Location: 3099651-3099864 bp Feature: domain Description: HTH_Tnp_1 Location: 3099651 -3099864 bp Feature: gene Location: 3098747-3099642 bp Feature: gene Location: 3100146-3100608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3100158-3100350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 001 58-31 00350 bp Feature: gene Location: 3100751-3101418 bp Feature: domain Description: IS285 Location: 3100781-3101159 bp Feature: domain Description: IS285 Location: 31 00781 -31 01 1 59 bp Feature: gene Location: 3101426-3101554 bp Feature: domain Description: RAYT Location: 3101429-3101555 bp Feature: domain Description: RAYT Location: 31 01 429-31 01 555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5339 (pfam17274), Asparaginase_2 (pfam01112), RVT-GII, DcuC (TIGR00771), HTH_Tnp_1 (pfam01527), IS285 (COG3328), RAYT (COG1943)