myRT

myRT report for GCA_013487905.1_ASM1348790v1

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Seq: CP047415.1 Lactobacillus crispatus strain 1D chromosome, complete genome (2349358 bp)
Overview 1 RT 1: 1435672-1440759 bp 2 RT 2: 2064116-2070883 bp Neighborhood of RT #1 [1435672, 1440767] PRK09311 ribH RVT-GII RVT-GII Tra8 Glyco_hydro_8 Neighborhood of RT #2 [2064116, 2071082] Glyco_hydro_68 Abi_2 RVT-AbiK Transposase_mut HicB Feature: gene Location: 1435672-1436850 bp Ori: QLL74154.1 Feature: domain Description: PRK09311 Location: 1435681-1436842 bp Feature: domain Description: PRK0931 1 Location: 1 435681 -1 436842 bp Feature: gene Location: 1436865-1437329 bp Ori: QLL74155.1 Feature: domain Description: ribH Location: 1436868-1437324 bp Feature: domain Description: ribH Location: 1 436868-1 437324 bp Feature: gene Location: 1437407-1438018 bp Ori: QLL75055.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437410-1437623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 43741 0-1 437623 bp Feature: gene Location: 1438037-1438204 bp Ori: QLL74156.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1438070-1438199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 438070-1 4381 99 bp Feature: gene Location: 1438564-1439290 bp Feature: domain Description: Tra8 Location: 1438594-1438930 bp Feature: domain Description: Tra8 Location: 1 438594-1 438930 bp Feature: gene Location: 1439670-1440767 bp Ori: QLL74157.1 Feature: domain Description: Glyco_hydro_8 Location: 1439787-1440759 bp Feature: domain Description: Glyco_hydro_8 Location: 1 439787-1 440759 bp Feature: gene Location: 2064116-2066095 bp Ori: QLL74715.1 Feature: domain Description: Glyco_hydro_68 Location: 2064656-2065994 bp Feature: domain Description: Glyco_hydro_68 Location: 2064656-2065994 bp Feature: gene Location: 2066353-2067365 bp Feature: domain Description: Abi_2 Location: 2066455-2066905 bp Feature: domain Description: Abi_2 Location: 2066455-2066905 bp Feature: gene Location: 2067766-2068680 bp Ori: QLL74716.1 Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2068234-2068654 bp Feature: RT Description: RVT-AbiK Note: AbiK RT Location: 2068234-2068654 bp Feature: gene Location: 2068797-2069975 bp Ori: QLL74717.1 Feature: domain Description: Transposase_mut Location: 2068827-2069913 bp Feature: domain Description: Transposase_mut Location: 2068827-206991 3 bp Feature: gene Location: 2070691-2071082 bp Feature: domain Description: HicB Location: 2070709-2070883 bp Feature: domain Description: HicB Location: 2070709-2070883 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09311 (bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II), ribH (PRK00061), RVT-GII, Tra8 (COG2826), Glyco_hydro_8 (pfam01270), Glyco_hydro_68 (pfam02435), Abi_2 (pfam07751), RVT-AbiK, Transposase_mut (pfam00872), HicB (pfam05534)