myRT

myRT report for GCA_013488005.1_ASM1348800v1

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Seq: CP047983.1 Aeromonas caviae strain 1605-27183 chromosome, complete genome (4861894 bp)
Overview 1 RT 1: 1959327-1964149 bp 2 RT 2: 3290130-3293965 bp 3 RT 3: 4397631-4404214 bp Neighborhood of RT #1 [1959327, 1964181] PHA00430 Avd_like RVT-DGRs MPP_PrpA_PrpB Neighborhood of RT #2 [3290130, 3294111] RVT-Retrons YybH Neighborhood of RT #3 [4397631, 4404216] DUF3289 SLATT_5 RVT-UG17 COG3177 PRK10328 Feature: gene Location: 1959327-1961054 bp Ori: QLL88439.1 Feature: domain Description: PHA00430 Location: 1959741-1959996 bp Feature: domain Description: PHA00430 Location: 1 959741 -1 959996 bp Feature: gene Location: 1961115-1961459 bp Ori: QLL88440.1 Gene: avd Feature: domain Description: Avd_like Location: 1961145-1961445 bp Feature: domain Description: Avd_like Location: 1 961 1 45-1 961 445 bp Feature: gene Location: 1961477-1962748 bp Ori: QLL90844.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1961921-1962542 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 961 921 -1 962542 bp Feature: gene Location: 1962745-1963026 bp Feature: gene Location: 1963471-1964181 bp Ori: QLL88442.1 Feature: domain Description: MPP_PrpA_PrpB Location: 1963519-1964149 bp Feature: domain Description: MPP_PrpA_PrpB Location: 1 96351 9-1 9641 49 bp Feature: gene Location: 3290130-3290987 bp Feature: gene Location: 3290987-3291343 bp Feature: gene Location: 3291582-3292631 bp Ori: QLL89441.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3291834-3292377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3291 834-3292377 bp Feature: gene Location: 3292927-3293193 bp Feature: gene Location: 3293587-3294111 bp Ori: QLL89443.1 Feature: domain Description: YybH Location: 3293611-3293965 bp Feature: domain Description: YybH Location: 329361 1 -3293965 bp Feature: gene Location: 4397631-4398734 bp Ori: QLL91003.1 Feature: domain Description: DUF3289 Location: 4398132-4398702 bp Feature: domain Description: DUF3289 Location: 43981 32-4398702 bp Feature: gene Location: 4399815-4400450 bp Ori: QLL90349.1 Feature: domain Description: SLATT_5 Location: 4399824-4400379 bp Feature: domain Description: SLATT_5 Location: 4399824-4400379 bp Feature: gene Location: 4400459-4401790 bp Ori: QLL90350.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4400684-4401278 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 4400684-4401 278 bp Feature: gene Location: 4402281-4403408 bp Ori: QLL90351.1 Feature: domain Description: COG3177 Location: 4402296-4403382 bp Feature: domain Description: COG31 77 Location: 4402296-4403382 bp Feature: gene Location: 4403806-4404216 bp Ori: QLL90352.1 Feature: domain Description: PRK10328 Location: 4403809-4404214 bp Feature: domain Description: PRK1 0328 Location: 4403809-440421 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00430 (tail fiber protein), Avd_like (cd16376), RVT-DGRs, MPP_PrpA_PrpB (cd07424), RVT-Retrons, YybH (COG4319), DUF3289 (pfam11692), SLATT_5 (pfam18160), RVT-UG17, COG3177 (Fic family protein )
PRK10328 (DNA-binding protein StpA)