myRT

myRT report for GCA_013786345.1_ASM1378634v1

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Seq: CP056648.1 Citrobacter sp. RHBSTW-00229 plasmid pRHBSTW-00229_2, complete sequence (78367 bp)
Overview 1 RT 1: 49763-54192 bp 2 RT 2: 57408-62525 bp 3 RT 3: 68214-73760 bp Neighborhood of RT #1 [49763, 54209] PHA02517 RVT-GII GIIM InsE PRK03598 Neighborhood of RT #2 [57408, 62605] DDE_Tnp_Tn3 InsE RVT-GII GIIM PHA02517 DDE_Tnp_Tn3 Neighborhood of RT #3 [68214, 73765] Rep_3 InsA DDE_Tnp_IS1 RVT-GII PRK10276 umuC Feature: gene Location: 49763-50017 bp Feature: gene Location: 50036-50512 bp Feature: domain Description: PHA02517 Location: 50039-50504 bp Feature: domain Description: PHA0251 7 Location: 50039-50504 bp Feature: gene Location: 50593-52101 bp Ori: QLX42519.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50851-51583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50851 -51 583 bp Feature: domain Description: GIIM Note: maturase Location: 51658-51856 bp Feature: domain Description: GIIM Note: maturase Location: 51 658-51 856 bp Feature: gene Location: 52774-53453 bp Feature: domain Description: InsE Location: 52786-53044 bp Feature: domain Description: InsE Location: 52786-53044 bp Feature: gene Location: 53514-54209 bp Ori: QLX42536.1 Feature: domain Description: PRK03598 Location: 53562-54192 bp Feature: domain Description: PRK03598 Location: 53562-541 92 bp Feature: gene Location: 57408-58007 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 57780-58002 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 57780-58002 bp Feature: gene Location: 58059-58795 bp Feature: domain Description: InsE Location: 58071-58410 bp Feature: domain Description: InsE Location: 58071 -5841 0 bp Feature: gene Location: 59468-60976 bp Ori: QLX42520.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59726-60458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59726-60458 bp Feature: domain Description: GIIM Note: maturase Location: 60533-60731 bp Feature: domain Description: GIIM Note: maturase Location: 60533-60731 bp Feature: gene Location: 61066-61539 bp Feature: domain Description: PHA02517 Location: 61072-61537 bp Feature: domain Description: PHA0251 7 Location: 61 072-61 537 bp Feature: gene Location: 61583-62605 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 61589-62525 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 61 589-62525 bp Feature: gene Location: 68214-68516 bp Feature: domain Description: Rep_3 Location: 68217-68478 bp Feature: domain Description: Rep_3 Location: 6821 7-68478 bp Feature: gene Location: 69344-70029 bp Feature: domain Description: InsA Location: 69350-69617 bp Feature: domain Description: InsA Location: 69350-6961 7 bp Feature: domain Description: DDE_Tnp_IS1 Location: 69710-69794 bp Feature: domain Description: DDE_Tnp_IS1 Location: 6971 0-69794 bp Feature: gene Location: 70181-71668 bp Ori: QLX42526.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70586-71276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70586-71 276 bp Feature: gene Location: 72069-72494 bp Ori: QLX42527.1 Gene: umuD Feature: domain Description: PRK10276 Location: 72072-72480 bp Feature: domain Description: PRK1 0276 Location: 72072-72480 bp Feature: gene Location: 72494-73765 bp Ori: QLX42528.1 Feature: domain Description: umuC Location: 72497-73760 bp Feature: domain Description: umuC Location: 72497-73760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK03598 (putative efflux pump membrane fusion protein; Provisional), DDE_Tnp_Tn3 (pfam01526), Rep_3 (pfam01051), InsA (COG3677), DDE_Tnp_IS1 (pfam03400), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
umuC (PRK03609)

Seq: CP056647.1 Citrobacter sp. RHBSTW-00229 chromosome, complete genome (5231053 bp)
Overview 1 RT 1: 506058-510784 bp 2 RT 2: 777290-781870 bp 3 RT 3: 1442453-1447508 bp 4 RT 4: 1461212-1469129 bp 5 RT 5: 2160432-2164557 bp 6 RT 6: 2186414-2191772 bp 7 RT 7: 2521913-2527567 bp 8 RT 8: 2727930-2733277 bp 9 RT 9: 2872996-2882263 bp 10 RT 10: 3027577-3032811 bp 11 RT 11: 3258234-3262816 bp 12 RT 12: 3421952-3426278 bp 13 RT 13: 3521333-3526338 bp 14 RT 14: 4418981-4424036 bp 15 RT 15: 4439814-4444058 bp Neighborhood of RT #1 [506058, 510807] PHA02517 RVT-GII GIIM InsE NT_2-5OAS_ClassI-CCAase Neighborhood of RT #2 [777290, 781872] PRK09692 InsE RVT-GII GIIM PHA02517 DUF1493 Neighborhood of RT #3 [1442453, 1447510] YafY DUF932 RVT_N RVT-GII YkfC YeeP Neighborhood of RT #4 [1461212, 1469134] InsE RVT-GII GIIM PHA02517 PHA02517 RVT-GII GIIM fruct_sucro_rep Neighborhood of RT #5 [2160432, 2164598] Phage_holin_8 PHA02517 RVT-GII GIIM InsE OYE_like_4_FMN Neighborhood of RT #6 [2186414, 2191772] Arm-DNA-bind_1 Phage_int_SAM_3 INT_Lambda_C PHA02517 RVT-GII GIIM InsE Neighborhood of RT #7 [2521913, 2527605] PHA02517 RVT-GII GIIM InsE PRK05419 Neighborhood of RT #8 [2727930, 2733312] PHA02517 RVT-GII GIIM InsE PRK11175 Neighborhood of RT #9 [2872996, 2882265] NAD_binding_9 InsE RVT-GII GIIM PHA02517 PHA02517 RVT-GII GIIM InsE SCPU Neighborhood of RT #10 [3027577, 3033049] DUF262 PHA02517 RVT-GII GIIM InsE Zn_Tnp_IS1 HTH_Tnp_IS1 Neighborhood of RT #11 [3258234, 3262816] INT_C_like_3 InsE RVT-GII GIIM PHA02517 Neighborhood of RT #12 [3421952, 3426277] PRK10128 PHA02517 RVT-GII GIIM InsE PRK10128 Neighborhood of RT #13 [3521333, 3526338] InsE RVT-GII GIIM PHA02517 Neighborhood of RT #14 [4418981, 4424038] YafY DUF932 RVT_N RVT-GII YkfC YeeP Neighborhood of RT #15 [4439814, 4444096] DDE_Tnp_IS66_C InsE RVT-GII GIIM PHA02517 DUF2778 Feature: gene Location: 506058-506744 bp Feature: gene Location: 506763-507239 bp Feature: domain Description: PHA02517 Location: 506766-507231 bp Feature: domain Description: PHA02 517 Location: 506766-5072 31 bp Feature: gene Location: 507320-508828 bp Ori: QLX38172.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507578-508310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 507578-508310 bp Feature: domain Description: GIIM Note: maturase Location: 508385-508583 bp Feature: domain Description: GIIM Note: maturase Location: 508385-508583 bp Feature: gene Location: 509501-510180 bp Feature: domain Description: InsE Location: 509513-509771 bp Feature: domain Description: InsE Location: 509513-509771 bp Feature: gene Location: 510244-510807 bp Feature: domain Description: NT_2-5OAS_ClassI-CCAase Location: 510328-510784 bp Feature: domain Description: NT_2 -5OAS_ClassI-CCAase Location: 51032 8-510784 bp Feature: gene Location: 777290-778270 bp Feature: domain Description: PRK09692 Location: 777299-778268 bp Feature: domain Description: PRK09692 Location: 7772 99-7782 68 bp Feature: gene Location: 778343-779031 bp Feature: domain Description: InsE Location: 778352-778637 bp Feature: domain Description: InsE Location: 778352 -778637 bp Feature: gene Location: 779704-781212 bp Ori: QLX38403.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779962-780694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779962 -780694 bp Feature: domain Description: GIIM Note: maturase Location: 780769-780967 bp Feature: domain Description: GIIM Note: maturase Location: 780769-780967 bp Feature: gene Location: 781293-781781 bp Feature: domain Description: PHA02517 Location: 781296-781770 bp Feature: domain Description: PHA02 517 Location: 7812 96-781770 bp Feature: gene Location: 781786-781872 bp Feature: domain Description: DUF1493 Location: 781801-781870 bp Feature: domain Description: DUF1493 Location: 781801-781870 bp Feature: gene Location: 1442453-1443154 bp Feature: domain Description: YafY Location: 1442471-1443143 bp Feature: domain Description: YafY Location: 1442 471-1443143 bp Feature: gene Location: 1443371-1444060 bp Feature: domain Description: DUF932 Location: 1443374-1444025 bp Feature: domain Description: DUF932 Location: 1443374-144402 5 bp Feature: gene Location: 1444642-1446351 bp Ori: QLX38964.1 Gene: ltrA Feature: domain Description: RVT_N Location: 1444696-1444939 bp Feature: domain Description: RVT_N Location: 1444696-1444939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1444984-1445620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1444984-144562 0 bp Feature: domain Description: YkfC Location: 1445740-1445956 bp Feature: domain Description: YkfC Location: 1445740-1445956 bp Feature: gene Location: 1446424-1446555 bp Feature: gene Location: 1446647-1447510 bp Ori: QLX38965.1 Feature: domain Description: YeeP Location: 1446650-1447508 bp Feature: domain Description: YeeP Location: 1446650-1447508 bp Feature: gene Location: 1461212-1461403 bp Feature: gene Location: 1461626-1462305 bp Feature: domain Description: InsE Location: 1461638-1461896 bp Feature: domain Description: InsE Location: 1461638-1461896 bp Feature: gene Location: 1462978-1464486 bp Ori: QLX38974.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463236-1463968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14632 36-1463968 bp Feature: domain Description: GIIM Note: maturase Location: 1464043-1464241 bp Feature: domain Description: GIIM Note: maturase Location: 1464043-14642 41 bp Feature: gene Location: 1464567-1465043 bp Feature: domain Description: PHA02517 Location: 1464570-1465035 bp Feature: domain Description: PHA02 517 Location: 1464570-1465035 bp Feature: gene Location: 1465090-1465515 bp Feature: domain Description: PHA02517 Location: 1465180-1465516 bp Feature: domain Description: PHA02 517 Location: 1465180-1465516 bp Feature: gene Location: 1466188-1467696 bp Ori: QLX38975.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466446-1467178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1466446-1467178 bp Feature: domain Description: GIIM Note: maturase Location: 1467253-1467451 bp Feature: domain Description: GIIM Note: maturase Location: 14672 53-1467451 bp Feature: gene Location: 1467861-1467994 bp Feature: gene Location: 1468130-1469134 bp Ori: QLX38976.1 Feature: domain Description: fruct_sucro_rep Location: 1468151-1469129 bp Feature: domain Description: fruct_sucro_rep Location: 1468151-146912 9 bp Feature: gene Location: 2160432-2160539 bp Feature: domain Description: Phage_holin_8 Location: 2160435-2160540 bp Feature: domain Description: Phage_holin_8 Location: 2 160435-2 160540 bp Feature: gene Location: 2160600-2161088 bp Feature: domain Description: PHA02517 Location: 2160603-2161077 bp Feature: domain Description: PHA02 517 Location: 2 160603-2 161077 bp Feature: gene Location: 2161169-2162677 bp Ori: QLX39571.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2161427-2162159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 16142 7-2 162 159 bp Feature: domain Description: GIIM Note: maturase Location: 2162234-2162432 bp Feature: domain Description: GIIM Note: maturase Location: 2 162 2 34-2 162 432 bp Feature: gene Location: 2163350-2164038 bp Feature: domain Description: InsE Location: 2163359-2163644 bp Feature: domain Description: InsE Location: 2 163359-2 163644 bp Feature: gene Location: 2164113-2164598 bp Feature: domain Description: OYE_like_4_FMN Location: 2164119-2164557 bp Feature: domain Description: OYE_like_4_FMN Location: 2 164119-2 164557 bp Feature: gene Location: 2186414-2187475 bp Ori: QLX39591.1 Feature: domain Description: Arm-DNA-bind_1 Location: 2186426-2186603 bp Feature: domain Description: Arm-DNA-bind_1 Location: 2 18642 6-2 186603 bp Feature: domain Description: Phage_int_SAM_3 Location: 2186621-2186780 bp Feature: domain Description: Phage_int_SAM_3 Location: 2 18662 1-2 186780 bp Feature: domain Description: INT_Lambda_C Location: 2186948-2187461 bp Feature: domain Description: INT_Lambda_C Location: 2 186948-2 187461 bp Feature: gene Location: 2187472-2187960 bp Feature: domain Description: PHA02517 Location: 2187475-2187949 bp Feature: domain Description: PHA02 517 Location: 2 187475-2 187949 bp Feature: gene Location: 2188041-2189549 bp Ori: QLX39592.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2188299-2189031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1882 99-2 189031 bp Feature: domain Description: GIIM Note: maturase Location: 2189106-2189304 bp Feature: domain Description: GIIM Note: maturase Location: 2 189106-2 189304 bp Feature: gene Location: 2190222-2190910 bp Feature: domain Description: InsE Location: 2190231-2190516 bp Feature: domain Description: InsE Location: 2 1902 31-2 190516 bp Feature: gene Location: 2190942-2191772 bp Feature: gene Location: 2521913-2522811 bp Feature: gene Location: 2523068-2523556 bp Feature: domain Description: PHA02517 Location: 2523071-2523545 bp Feature: domain Description: PHA02 517 Location: 2 52 3071-2 52 3545 bp Feature: gene Location: 2523637-2525145 bp Ori: QLX39901.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2523895-2524627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 52 3895-2 52 462 7 bp Feature: domain Description: GIIM Note: maturase Location: 2524702-2524900 bp Feature: domain Description: GIIM Note: maturase Location: 2 52 4702 -2 52 4900 bp Feature: gene Location: 2525818-2526506 bp Feature: domain Description: InsE Location: 2525827-2526112 bp Feature: domain Description: InsE Location: 2 52 582 7-2 52 6112 bp Feature: gene Location: 2526979-2527605 bp Ori: QLX39902.1 Gene: msrQ Feature: domain Description: PRK05419 Location: 2526985-2527567 bp Feature: domain Description: PRK05419 Location: 2 52 6985-2 52 7567 bp Feature: gene Location: 2727930-2728130 bp Feature: gene Location: 2728224-2728700 bp Feature: domain Description: PHA02517 Location: 2728227-2728692 bp Feature: domain Description: PHA02 517 Location: 2 72 82 2 7-2 72 8692 bp Feature: gene Location: 2728781-2730289 bp Ori: QLX40068.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2729039-2729771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 9039-2 72 9771 bp Feature: domain Description: GIIM Note: maturase Location: 2729846-2730044 bp Feature: domain Description: GIIM Note: maturase Location: 2 72 9846-2 730044 bp Feature: gene Location: 2730962-2731641 bp Feature: domain Description: InsE Location: 2730974-2731232 bp Feature: domain Description: InsE Location: 2 730974-2 7312 32 bp Feature: gene Location: 2732362-2733312 bp Ori: QLX40069.1 Gene: uspE Feature: domain Description: PRK11175 Location: 2732371-2733277 bp Feature: domain Description: PRK11175 Location: 2 732 371-2 7332 77 bp Feature: gene Location: 2872996-2874213 bp Feature: domain Description: NAD_binding_9 Location: 2873017-2873545 bp Feature: domain Description: NAD_binding_9 Location: 2 873017-2 873545 bp Feature: gene Location: 2874286-2874974 bp Feature: domain Description: InsE Location: 2874295-2874580 bp Feature: domain Description: InsE Location: 2 8742 95-2 874580 bp Feature: gene Location: 2875647-2877155 bp Ori: QLX40190.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2875905-2876637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 875905-2 876637 bp Feature: domain Description: GIIM Note: maturase Location: 2876712-2876910 bp Feature: domain Description: GIIM Note: maturase Location: 2 876712 -2 876910 bp Feature: gene Location: 2877236-2877724 bp Feature: domain Description: PHA02517 Location: 2877239-2877713 bp Feature: domain Description: PHA02 517 Location: 2 8772 39-2 877713 bp Feature: gene Location: 2878212-2878688 bp Feature: domain Description: PHA02517 Location: 2878215-2878680 bp Feature: domain Description: PHA02 517 Location: 2 8782 15-2 878680 bp Feature: gene Location: 2878769-2880277 bp Ori: QLX40191.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2879027-2879759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 87902 7-2 879759 bp Feature: domain Description: GIIM Note: maturase Location: 2879834-2880032 bp Feature: domain Description: GIIM Note: maturase Location: 2 879834-2 880032 bp Feature: gene Location: 2880950-2881629 bp Feature: domain Description: InsE Location: 2880962-2881220 bp Feature: domain Description: InsE Location: 2 880962 -2 8812 2 0 bp Feature: gene Location: 2881735-2882265 bp Ori: QLX40192.1 Feature: domain Description: SCPU Location: 2881765-2882263 bp Feature: domain Description: SCPU Location: 2 881765-2 882 2 63 bp Feature: gene Location: 3027577-3029028 bp Ori: QLX42386.1 Feature: domain Description: DUF262 Location: 3027637-3028198 bp Feature: domain Description: DUF2 62 Location: 302 7637-302 8198 bp Feature: gene Location: 3029053-3029541 bp Feature: domain Description: PHA02517 Location: 3029056-3029530 bp Feature: domain Description: PHA02 517 Location: 302 9056-302 9530 bp Feature: gene Location: 3029622-3031130 bp Ori: QLX40321.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3029880-3030612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 9880-3030612 bp Feature: domain Description: GIIM Note: maturase Location: 3030687-3030885 bp Feature: domain Description: GIIM Note: maturase Location: 3030687-3030885 bp Feature: gene Location: 3031803-3032491 bp Feature: domain Description: InsE Location: 3031812-3032097 bp Feature: domain Description: InsE Location: 3031812 -3032 097 bp Feature: gene Location: 3032547-3033049 bp Feature: domain Description: Zn_Tnp_IS1 Location: 3032553-3032655 bp Feature: domain Description: Zn_Tnp_IS1 Location: 3032 553-3032 655 bp Feature: domain Description: HTH_Tnp_IS1 Location: 3032676-3032811 bp Feature: domain Description: HTH_Tnp_IS1 Location: 3032 676-3032 811 bp Feature: gene Location: 3258234-3258845 bp Ori: QLX40526.1 Feature: domain Description: INT_C_like_3 Location: 3258282-3258804 bp Feature: domain Description: INT_C_like_3 Location: 32 582 82 -32 58804 bp Feature: gene Location: 3259017-3259705 bp Feature: domain Description: InsE Location: 3259026-3259311 bp Feature: domain Description: InsE Location: 32 5902 6-32 59311 bp Feature: gene Location: 3260378-3261886 bp Ori: QLX40527.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3260636-3261368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 60636-32 61368 bp Feature: domain Description: GIIM Note: maturase Location: 3261443-3261641 bp Feature: domain Description: GIIM Note: maturase Location: 32 61443-32 61641 bp Feature: gene Location: 3261967-3262455 bp Feature: domain Description: PHA02517 Location: 3261970-3262444 bp Feature: domain Description: PHA02 517 Location: 32 61970-32 62 444 bp Feature: gene Location: 3262466-3262816 bp Feature: gene Location: 3421952-3422539 bp Feature: domain Description: PRK10128 Location: 3421964-3422537 bp Feature: domain Description: PRK1012 8 Location: 342 1964-342 2 537 bp Feature: gene Location: 3422526-3423014 bp Feature: domain Description: PHA02517 Location: 3422529-3423003 bp Feature: domain Description: PHA02 517 Location: 342 2 52 9-342 3003 bp Feature: gene Location: 3423095-3424603 bp Ori: QLX40659.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3423353-3424085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342 3353-342 4085 bp Feature: domain Description: GIIM Note: maturase Location: 3424160-3424358 bp Feature: domain Description: GIIM Note: maturase Location: 342 4160-342 4358 bp Feature: gene Location: 3425276-3425964 bp Feature: domain Description: InsE Location: 3425285-3425570 bp Feature: domain Description: InsE Location: 342 52 85-342 5570 bp Feature: gene Location: 3426038-3426277 bp Feature: domain Description: PRK10128 Location: 3426041-3426278 bp Feature: domain Description: PRK1012 8 Location: 342 6041-342 62 78 bp Feature: gene Location: 3521333-3521872 bp Feature: gene Location: 3521895-3522574 bp Feature: domain Description: InsE Location: 3521907-3522165 bp Feature: domain Description: InsE Location: 352 1907-352 2 165 bp Feature: gene Location: 3523247-3524755 bp Ori: QLX40748.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3523505-3524237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 352 3505-352 42 37 bp Feature: domain Description: GIIM Note: maturase Location: 3524312-3524510 bp Feature: domain Description: GIIM Note: maturase Location: 352 4312 -352 4510 bp Feature: gene Location: 3524836-3525312 bp Feature: domain Description: PHA02517 Location: 3524839-3525304 bp Feature: domain Description: PHA02 517 Location: 352 4839-352 5304 bp Feature: gene Location: 3525907-3526338 bp Feature: gene Location: 4418981-4419682 bp Ori: QLX41526.1 Feature: domain Description: YafY Location: 4418999-4419671 bp Feature: domain Description: YafY Location: 4418999-4419671 bp Feature: gene Location: 4419899-4420588 bp Feature: domain Description: DUF932 Location: 4419902-4420553 bp Feature: domain Description: DUF932 Location: 4419902 -442 0553 bp Feature: gene Location: 4421170-4422879 bp Ori: QLX41527.1 Gene: ltrA Feature: domain Description: RVT_N Location: 4421224-4421467 bp Feature: domain Description: RVT_N Location: 442 12 2 4-442 1467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4421512-4422148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442 1512 -442 2 148 bp Feature: domain Description: YkfC Location: 4422268-4422484 bp Feature: domain Description: YkfC Location: 442 2 2 68-442 2 484 bp Feature: gene Location: 4422952-4423083 bp Feature: gene Location: 4423175-4424038 bp Ori: QLX41528.1 Feature: domain Description: YeeP Location: 4423178-4424036 bp Feature: domain Description: YeeP Location: 442 3178-442 4036 bp Feature: gene Location: 4439814-4439978 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4439850-4439961 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4439850-4439961 bp Feature: gene Location: 4440212-4440891 bp Feature: domain Description: InsE Location: 4440224-4440482 bp Feature: domain Description: InsE Location: 44402 2 4-4440482 bp Feature: gene Location: 4441564-4443072 bp Ori: QLX41541.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4441822-4442554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 444182 2 -4442 554 bp Feature: domain Description: GIIM Note: maturase Location: 4442629-4442827 bp Feature: domain Description: GIIM Note: maturase Location: 4442 62 9-4442 82 7 bp Feature: gene Location: 4443153-4443629 bp Feature: domain Description: PHA02517 Location: 4443156-4443621 bp Feature: domain Description: PHA02 517 Location: 4443156-444362 1 bp Feature: gene Location: 4443677-4444096 bp Ori: QLX41542.1 Feature: domain Description: DUF2778 Location: 4443689-4444058 bp Feature: domain Description: DUF2 778 Location: 4443689-4444058 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), NT_2-5OAS_ClassI-CCAase (cd05400), PRK09692 (Integrase; provisional), DUF1493 (pfam07377), YafY (COG2378), DUF932 (pfam06067), RVT_N (pfam13655)
YkfC (COG3344), YeeP (COG3596), fruct_sucro_rep (TIGR02417), Phage_holin_8 (pfam16931), OYE_like_4_FMN (cd04735), Arm-DNA-bind_1 (pfam09003), Phage_int_SAM_3 (pfam14659), INT_Lambda_C (cd00800), PRK05419 (protein-methionine-sulfoxide reductase heme-binding subunit MsrQ), PRK11175 (universal stress protein UspE; Provisional)
NAD_binding_9 (pfam13454), SCPU (smart00972), DUF262 (pfam03235), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), INT_C_like_3 (cd01192), PRK10128 (2-keto-3-deoxy-L-rhamnonate aldolase; Provisional), DDE_Tnp_IS66_C (pfam13817), DUF2778 (pfam10908)