myRT

myRT report for GCA_013792125.1_ASM1379212v1

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Seq: CP056850.1 Citrobacter freundii strain RHBSTW-00120 chromosome, complete genome (5126944 bp)
Overview 1 RT 1: 258554-264032 bp 2 RT 2: 749044-754423 bp Neighborhood of RT #1 [258554, 264088] COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII LysR PTDH Neighborhood of RT #2 [749044, 754434] PHA02517 RVT-GII HTH_38 Tra8 Feature: gene Location: 258554-260095 bp Ori: QLZ57854.1 Feature: domain Description: COG4584 Location: 258704-259466 bp Feature: domain Description: COG4584 Location: 258704-259466 bp Feature: gene Location: 260108-260863 bp Ori: QLZ57855.1 Feature: domain Description: IstB_IS21_ATP Location: 260180-260264 bp Feature: domain Description: IstB_IS21 _ATP Location: 2601 80-260264 bp Feature: domain Description: IstB_IS21 Location: 260267-260795 bp Feature: domain Description: IstB_IS21 Location: 260267-260795 bp Feature: gene Location: 261617-262309 bp Ori: QLZ62120.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261665-262256 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 665-262256 bp Feature: gene Location: 262224-263084 bp Ori: QLZ57856.1 Feature: domain Description: LysR Location: 262233-263076 bp Feature: domain Description: LysR Location: 262233-263076 bp Feature: gene Location: 263078-264088 bp Ori: QLZ57857.1 Feature: domain Description: PTDH Location: 263084-264032 bp Feature: domain Description: PTDH Location: 263084-264032 bp Feature: gene Location: 749044-749541 bp Feature: gene Location: 750117-750584 bp Feature: domain Description: PHA02517 Location: 750120-750579 bp Feature: domain Description: PHA0251 7 Location: 7501 20-750579 bp Feature: gene Location: 750665-752172 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750923-751037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 750923-751 037 bp Feature: gene Location: 752845-753274 bp Feature: gene Location: 753283-754434 bp Ori: QLZ58310.1 Feature: domain Description: HTH_38 Location: 753292-753406 bp Feature: domain Description: HTH_38 Location: 753292-753406 bp Feature: domain Description: Tra8 Location: 753442-754423 bp Feature: domain Description: Tra8 Location: 753442-754423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-GII, LysR (COG0583), PTDH (cd12157), PHA02517 (putative transposase OrfB; Reviewed), HTH_38 (pfam13936), Tra8 (COG2826)