myRT

myRT report for GCA_013797615.1_ASM1379761v1

Download annotations/find similar RTs

Seq: CP056899.1 Citrobacter sp. RHBSTW-00017 chromosome, complete genome (5052482 bp)
Overview 1 RT 1: 733450-738840 bp 2 RT 2: 3895457-3900651 bp Neighborhood of RT #1 [733450, 738840] HTH_38 Tra8 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3895457, 3900662] fruct_sucro_rep RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 733450-734601 bp Ori: QMA30973.1 Feature: domain Description: HTH_38 Location: 733459-733573 bp Feature: domain Description: HTH_38 Location: 733459-733573 bp Feature: domain Description: Tra8 Location: 733609-734590 bp Feature: domain Description: Tra8 Location: 733609-734590 bp Feature: gene Location: 734610-735039 bp Feature: gene Location: 735711-737219 bp Ori: QMA34718.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735969-736701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735969-736701 bp Feature: domain Description: GIIM Note: maturase Location: 736776-736974 bp Feature: domain Description: GIIM Note: maturase Location: 736776-736974 bp Feature: gene Location: 737300-737767 bp Feature: domain Description: PHA02517 Location: 737303-737762 bp Feature: domain Description: PHA0251 7 Location: 737303-737762 bp Feature: gene Location: 738343-738840 bp Feature: gene Location: 3895457-3896461 bp Ori: QMA33721.1 Feature: domain Description: fruct_sucro_rep Location: 3895478-3896456 bp Feature: domain Description: fruct_sucro_rep Location: 3895478-3896456 bp Feature: gene Location: 3896597-3896730 bp Feature: gene Location: 3896895-3898403 bp Ori: QMA34852.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3897153-3897885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38971 53-3897885 bp Feature: domain Description: GIIM Note: maturase Location: 3897960-3898158 bp Feature: domain Description: GIIM Note: maturase Location: 3897960-38981 58 bp Feature: gene Location: 3899076-3899501 bp Feature: domain Description: PHA02517 Location: 3899166-3899502 bp Feature: domain Description: PHA0251 7 Location: 38991 66-3899502 bp Feature: gene Location: 3899511-3900662 bp Ori: QMA33722.1 Feature: domain Description: HTH_38 Location: 3899520-3899634 bp Feature: domain Description: HTH_38 Location: 3899520-3899634 bp Feature: domain Description: Tra8 Location: 3899670-3900651 bp Feature: domain Description: Tra8 Location: 3899670-3900651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), fruct_sucro_rep (TIGR02417)