myRT

myRT report for GCA_013798355.1_ASM1379835v1

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Seq: CP056910.1 Citrobacter freundii strain RHBSTW-00006 chromosome, complete genome (5182470 bp)
Overview 1 RT 1: 684329-688505 bp 2 RT 2: 4089529-4094781 bp Neighborhood of RT #1 [684329, 688505] TIGR02646 COG3950 RVT-Retrons Neighborhood of RT #2 [4089529, 4094792] fruct_sucro_rep RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 684329-684976 bp Ori: QMA45724.1 Feature: domain Description: TIGR02646 Location: 684398-684785 bp Feature: domain Description: TIGR02646 Location: 684398-684785 bp Feature: gene Location: 684979-686631 bp Ori: QMA45725.1 Feature: domain Description: COG3950 Location: 685177-686596 bp Feature: domain Description: COG3950 Location: 6851 77-686596 bp Feature: gene Location: 686628-687560 bp Ori: QMA45726.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 686730-687327 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 686730-687327 bp Feature: gene Location: 687994-688353 bp Feature: gene Location: 688350-688505 bp Feature: gene Location: 4089529-4090533 bp Ori: QMA48730.1 Feature: domain Description: fruct_sucro_rep Location: 4089550-4090528 bp Feature: domain Description: fruct_sucro_rep Location: 4089550-4090528 bp Feature: gene Location: 4090669-4090802 bp Feature: gene Location: 4090967-4092475 bp Ori: QMA49816.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4091225-4091957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4091 225-4091 957 bp Feature: domain Description: GIIM Note: maturase Location: 4092032-4092230 bp Feature: domain Description: GIIM Note: maturase Location: 4092032-4092230 bp Feature: gene Location: 4093148-4093576 bp Feature: domain Description: PHA02517 Location: 4093238-4093577 bp Feature: domain Description: PHA0251 7 Location: 4093238-4093577 bp Feature: gene Location: 4093641-4094792 bp Ori: QMA48731.1 Feature: domain Description: HTH_38 Location: 4093656-4093764 bp Feature: domain Description: HTH_38 Location: 4093656-4093764 bp Feature: domain Description: Tra8 Location: 4093800-4094781 bp Feature: domain Description: Tra8 Location: 4093800-4094781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, fruct_sucro_rep (TIGR02417), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_38 (pfam13936), Tra8 (COG2826)