myRT

myRT report for GCA_013820225.1_ASM1382022v1

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Seq: CP057230.1 Escherichia fergusonii strain RHB32-C16 plasmid pRHB32-C16_2, complete sequence (145940 bp)
Overview 1 RT 1: 112065-115775 bp Neighborhood of RT #1 [112065, 115783] RVT_N RVT-GII GIIM HNHc PRK09738 Feature: gene Location: 112065-112352 bp Feature: gene Location: 112377-112583 bp Feature: gene Location: 113554-115221 bp Ori: QME88307.1 Gene: ltrA Feature: domain Description: RVT_N Location: 113602-113839 bp Feature: domain Description: RVT_N Location: 1 1 3602-1 1 3839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113890-114532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3890-1 1 4532 bp Feature: domain Description: GIIM Note: maturase Location: 114583-114817 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 4583-1 1 481 7 bp Feature: domain Description: HNHc Note: nucleases Location: 115027-115186 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 5027-1 1 51 86 bp Feature: gene Location: 115362-115529 bp Feature: gene Location: 115622-115783 bp Ori: QME88309.1 Feature: domain Description: PRK09738 Location: 115625-115775 bp Feature: domain Description: PRK09738 Location: 1 1 5625-1 1 5775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)

Seq: CP057229.1 Escherichia fergusonii strain RHB32-C16 chromosome, complete genome (4619411 bp)
Overview 1 RT 1: 2869418-2873298 bp Neighborhood of RT #1 [2869418, 2873303] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 2869418-2870134 bp Ori: QME86494.1 Gene: rph Feature: domain Description: rph Location: 2869421-2870129 bp Feature: domain Description: rph Location: 2 86942 1-2 87012 9 bp Feature: gene Location: 2870200-2870841 bp Ori: QME86495.1 Gene: pyrE Feature: domain Description: pyrE Location: 2870203-2870836 bp Feature: domain Description: pyrE Location: 2 8702 03-2 870836 bp Feature: gene Location: 2871139-2872098 bp Ori: QME86496.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2871274-2871823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8712 74-2 87182 3 bp Feature: gene Location: 2872142-2872738 bp Ori: QME86497.1 Gene: slmA Feature: domain Description: slmA Location: 2872148-2872724 bp Feature: domain Description: slmA Location: 2 872 148-2 872 72 4 bp Feature: gene Location: 2872845-2873303 bp Ori: QME86498.1 Gene: dut Feature: domain Description: dut Location: 2872851-2873298 bp Feature: domain Description: dut Location: 2 872 851-2 8732 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)