myRT

myRT report for GCA_013820465.1_ASM1382046v1

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Seq: CP057238.1 Escherichia fergusonii strain RHB32-C09 chromosome, complete genome (4619408 bp)
Overview 1 RT 1: 2869418-2873298 bp Neighborhood of RT #1 [2869418, 2873303] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 2869418-2870134 bp Ori: QME95647.1 Gene: rph Feature: domain Description: rph Location: 2869421-2870129 bp Feature: domain Description: rph Location: 2869421 -28701 29 bp Feature: gene Location: 2870200-2870841 bp Ori: QME95648.1 Gene: pyrE Feature: domain Description: pyrE Location: 2870203-2870836 bp Feature: domain Description: pyrE Location: 2870203-2870836 bp Feature: gene Location: 2871139-2872098 bp Ori: QME95649.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2871274-2871823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2871 274-2871 823 bp Feature: gene Location: 2872142-2872738 bp Ori: QME95650.1 Gene: slmA Feature: domain Description: slmA Location: 2872148-2872724 bp Feature: domain Description: slmA Location: 28721 48-2872724 bp Feature: gene Location: 2872845-2873303 bp Ori: QME95651.1 Gene: dut Feature: domain Description: dut Location: 2872851-2873298 bp Feature: domain Description: dut Location: 2872851 -2873298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: CP057239.1 Escherichia fergusonii strain RHB32-C09 plasmid pRHB32-C09_2, complete sequence (145940 bp)
Overview 1 RT 1: 112065-115775 bp Neighborhood of RT #1 [112065, 115783] RVT_N RVT-GII GIIM HNHc PRK09738 Feature: gene Location: 112065-112352 bp Feature: gene Location: 112377-112583 bp Feature: gene Location: 113554-115221 bp Ori: QME97459.1 Gene: ltrA Feature: domain Description: RVT_N Location: 113602-113839 bp Feature: domain Description: RVT_N Location: 113602 -113839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113890-114532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113890-114532 bp Feature: domain Description: GIIM Note: maturase Location: 114583-114817 bp Feature: domain Description: GIIM Note: maturase Location: 114583-114817 bp Feature: domain Description: HNHc Note: nucleases Location: 115027-115186 bp Feature: domain Description: HNHc Note: nucleases Location: 11502 7-115186 bp Feature: gene Location: 115362-115529 bp Feature: gene Location: 115622-115783 bp Ori: QME97461.1 Feature: domain Description: PRK09738 Location: 115625-115775 bp Feature: domain Description: PRK09738 Location: 11562 5-115775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)