myRT

myRT report for GCA_013826045.1_ASM1382604v1

Download annotations/find similar RTs

Seq: CP057313.1 Klebsiella pneumoniae strain RHB30-C05 chromosome, complete genome (5146480 bp)
Overview 1 RT 1: 1143354-1150662 bp Neighborhood of RT #1 [1143354, 1150662] DUF3987 RVT-Retrons AAA_15 Feature: gene Location: 1143354-1144778 bp Ori: QMF81495.1 Feature: domain Description: DUF3987 Location: 1143447-1144521 bp Feature: domain Description: DUF3987 Location: 1 1 43447-1 1 44521 bp Feature: gene Location: 1145057-1145569 bp Feature: gene Location: 1145608-1146729 bp Ori: QMF81497.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1145788-1146331 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 45788-1 1 46331 bp Feature: gene Location: 1146849-1149101 bp Ori: QMF81498.1 Feature: domain Description: AAA_15 Location: 1146852-1147863 bp Feature: domain Description: AAA_1 5 Location: 1 1 46852-1 1 47863 bp Feature: gene Location: 1149994-1150662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3987 (pfam13148), RVT-Retrons, AAA_15 (pfam13175)

Seq: CP057315.1 Klebsiella pneumoniae strain RHB30-C05 plasmid pRHB30-C05_3, complete sequence (147224 bp)
Overview 1 RT 1: 63798-70372 bp Neighborhood of RT #1 [63798, 70374] PRK09907 rve_2 RVT-GII AfaD-like PRK15235 Feature: gene Location: 63798-64130 bp Ori: QMF85472.1 Gene: mazF Feature: domain Description: PRK09907 Location: 63801-64128 bp Feature: domain Description: PRK09907 Location: 63801-6412 8 bp Feature: gene Location: 64195-64287 bp Feature: domain Description: rve_2 Location: 64198-64270 bp Feature: domain Description: rve_2 Location: 64198-642 70 bp Feature: gene Location: 64724-66187 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65105-65795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65105-65795 bp Feature: gene Location: 67481-67930 bp Ori: QMF85473.1 Feature: domain Description: AfaD-like Location: 67577-67916 bp Feature: domain Description: AfaD-like Location: 67577-67916 bp Feature: gene Location: 67927-70374 bp Ori: QMF85474.1 Feature: domain Description: PRK15235 Location: 67933-70372 bp Feature: domain Description: PRK152 35 Location: 67933-70372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09907 (endoribonuclease MazF), rve_2 (pfam13333), RVT-GII, AfaD-like (cd18776), PRK15235 (outer membrane fimbrial usher protein SefC; Provisional)