myRT

myRT report for GCA_014041975.1_ASM1404197v1

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Seq: CP059490.1 Ralstonia solanacearum strain YQ plasmid unnamed, complete sequence (2039736 bp)
Overview 1 RT 1: 1712253-1759821 bp 2 RT 2: 1966123-1976429 bp Neighborhood of RT #1 [1712253, 1759850] RVT-GII PRK12467 PRK12467 PRK12316 PRK12467 PRK12467 PP-binding PRK12316 Thioesterase entF PRK12467 PP-binding PKS PKS_AT PRK12467 HemL seco_metab_LLM PRK12467 PRK12467 PP-binding Condensation A_NRPS_alphaAR PRK12467 COG4908 EntF PRK12467 PRK12467 Neighborhood of RT #2 [1966123, 1976429] Nterm_IS4 DDE_Tnp_1 MTES_1575 DUF3320 RVT-GII DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 Feature: gene Location: 1712253-1712411 bp Feature: gene Location: 1712446-1712757 bp Feature: gene Location: 1712895-1714427 bp Ori: QMT12978.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1713306-1713996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 3306-1 71 3996 bp Feature: gene Location: 1714948-1732809 bp Ori: QMT12979.1 Feature: domain Description: PRK12467 Location: 1715164-1716439 bp Feature: domain Description: PRK1 2467 Location: 1 71 51 64-1 71 6439 bp Feature: domain Description: PRK12467 Location: 1716469-1718251 bp Feature: domain Description: PRK1 2467 Location: 1 71 6469-1 71 8251 bp Feature: domain Description: PRK12316 Location: 1718395-1721551 bp Feature: domain Description: PRK1 231 6 Location: 1 71 8395-1 721 551 bp Feature: domain Description: PRK12467 Location: 1721584-1723171 bp Feature: domain Description: PRK1 2467 Location: 1 721 584-1 7231 71 bp Feature: domain Description: PRK12467 Location: 1723396-1727656 bp Feature: domain Description: PRK1 2467 Location: 1 723396-1 727656 bp Feature: domain Description: PP-binding Location: 1727710-1727899 bp Feature: domain Description: PP-binding Location: 1 72771 0-1 727899 bp Feature: domain Description: PRK12316 Location: 1727923-1731091 bp Feature: domain Description: PRK1 231 6 Location: 1 727923-1 731 091 bp Feature: domain Description: Thioesterase Location: 1731121-1731430 bp Feature: domain Description: Thioesterase Location: 1 731 1 21 -1 731 430 bp Feature: domain Description: entF Location: 1731931-1732336 bp Feature: domain Description: entF Location: 1 731 931 -1 732336 bp Feature: gene Location: 1732809-1759850 bp Ori: QMT12980.1 Feature: domain Description: PRK12467 Location: 1732845-1734339 bp Feature: domain Description: PRK1 2467 Location: 1 732845-1 734339 bp Feature: domain Description: PP-binding Location: 1734657-1734852 bp Feature: domain Description: PP-binding Location: 1 734657-1 734852 bp Feature: domain Description: PKS Location: 1734936-1736187 bp Feature: domain Description: PKS Location: 1 734936-1 7361 87 bp Feature: domain Description: PKS_AT Location: 1736499-1737351 bp Feature: domain Description: PKS_AT Location: 1 736499-1 737351 bp Feature: domain Description: PRK12467 Location: 1737660-1737891 bp Feature: domain Description: PRK1 2467 Location: 1 737660-1 737891 bp Feature: domain Description: HemL Location: 1738395-1739652 bp Feature: domain Description: HemL Location: 1 738395-1 739652 bp Feature: domain Description: seco_metab_LLM Location: 1739847-1740864 bp Feature: domain Description: seco_metab_LLM Location: 1 739847-1 740864 bp Feature: domain Description: PRK12467 Location: 1740900-1741965 bp Feature: domain Description: PRK1 2467 Location: 1 740900-1 741 965 bp Feature: domain Description: PRK12467 Location: 1742040-1743777 bp Feature: domain Description: PRK1 2467 Location: 1 742040-1 743777 bp Feature: domain Description: PP-binding Location: 1743834-1744023 bp Feature: domain Description: PP-binding Location: 1 743834-1 744023 bp Feature: domain Description: Condensation Location: 1744077-1745406 bp Feature: domain Description: Condensation Location: 1 744077-1 745406 bp Feature: domain Description: A_NRPS_alphaAR Location: 1745508-1745754 bp Feature: domain Description: A_NRPS_alphaAR Location: 1 745508-1 745754 bp Feature: domain Description: PRK12467 Location: 1745799-1750215 bp Feature: domain Description: PRK1 2467 Location: 1 745799-1 75021 5 bp Feature: domain Description: COG4908 Location: 1750488-1750854 bp Feature: domain Description: COG4908 Location: 1 750488-1 750854 bp Feature: domain Description: EntF Location: 1751079-1753017 bp Feature: domain Description: EntF Location: 1 751 079-1 75301 7 bp Feature: domain Description: PRK12467 Location: 1753119-1755258 bp Feature: domain Description: PRK1 2467 Location: 1 7531 1 9-1 755258 bp Feature: domain Description: PRK12467 Location: 1755279-1759821 bp Feature: domain Description: PRK1 2467 Location: 1 755279-1 759821 bp Feature: gene Location: 1966123-1967451 bp Ori: QMT13130.1 Feature: domain Description: Nterm_IS4 Location: 1966171-1966447 bp Feature: domain Description: Nterm_IS4 Location: 1 9661 71 -1 966447 bp Feature: domain Description: DDE_Tnp_1 Location: 1966510-1967182 bp Feature: domain Description: DDE_Tnp_1 Location: 1 96651 0-1 9671 82 bp Feature: gene Location: 1967824-1968864 bp Feature: domain Description: MTES_1575 Location: 1967884-1968175 bp Feature: domain Description: MTES_1 575 Location: 1 967884-1 9681 75 bp Feature: domain Description: DUF3320 Location: 1968349-1968490 bp Feature: domain Description: DUF3320 Location: 1 968349-1 968490 bp Feature: gene Location: 1968885-1970417 bp Ori: QMT13131.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1969296-1969986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 969296-1 969986 bp Feature: gene Location: 1970785-1975371 bp Feature: domain Description: DUF4011 Location: 1970893-1971478 bp Feature: domain Description: DUF401 1 Location: 1 970893-1 971 478 bp Feature: domain Description: DEXXQc_SF1 Location: 1971817-1972393 bp Feature: domain Description: DEXXQc_SF1 Location: 1 971 81 7-1 972393 bp Feature: domain Description: DEXXQc_SF1 Location: 1974001-1974763 bp Feature: domain Description: DEXXQc_SF1 Location: 1 974001 -1 974763 bp Feature: domain Description: KOG1803 Location: 1975114-1975282 bp Feature: domain Description: KOG1 803 Location: 1 9751 1 4-1 975282 bp Feature: gene Location: 1976208-1976429 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK12467 (peptide synthase; Provisional), PRK12316 (peptide synthase; Provisional), PP-binding (pfam00550), Thioesterase (pfam00975), entF (PRK10252), PKS (cd00833), PKS_AT (smart00827), HemL (COG0001), seco_metab_LLM (TIGR04020)
Condensation (pfam00668), A_NRPS_alphaAR (cd17647), COG4908 (Uncharacterized protein, contains a NRPS condensation (elongation) domain ), EntF (COG3319), Nterm_IS4 (pfam13006), DDE_Tnp_1 (pfam01609), MTES_1575 (pfam18741), DUF3320 (pfam11784), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043)
KOG1803 (KOG1803, DNA helicase )

Seq: CP059489.1 Ralstonia solanacearum strain YQ chromosome, complete genome (3782949 bp)
Overview 1 RT 1: 2498264-2503153 bp Neighborhood of RT #1 [2498264, 2503153] arc_metj PRK13876 RVT-GII PRK13876 Feature: gene Location: 2498264-2498728 bp Ori: QMT09540.1 Feature: domain Description: arc_metj Location: 2498279-2498387 bp Feature: domain Description: arc_metj Location: 2 4982 79-2 498387 bp Feature: gene Location: 2498725-2499654 bp Feature: domain Description: PRK13876 Location: 2498728-2499652 bp Feature: domain Description: PRK13876 Location: 2 49872 8-2 499652 bp Feature: gene Location: 2499674-2501206 bp Ori: QMT09541.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2500085-2500775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 500085-2 500775 bp Feature: gene Location: 2501572-2502648 bp Gene: traG Feature: domain Description: PRK13876 Location: 2501575-2502649 bp Feature: domain Description: PRK13876 Location: 2 501575-2 502 649 bp Feature: gene Location: 2502872-2503153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT arc_metj (LOAD_arc_metj), PRK13876 (conjugal transfer coupling protein TraG; Provisional), RVT-GII