myRT

myRT report for GCA_014076475.1_ASM1407647v1

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Seq: CP043573.1 Comamonas testosteroni strain R5-28 chromosome, complete genome (5726362 bp)
Overview 1 RT 1: 3911501-3920488 bp 2 RT 2: 4004796-4012416 bp Neighborhood of RT #1 [3911501, 3920613] carB PRK12564 RVT_N RVT-GII GIIM HNH SpoU RNase_HII_bacteria_HII_like Neighborhood of RT #2 [4004796, 4012418] PRK10700 ScpB RVT_N RVT-GII GIIM HNHc RluA mltD nlpD nlpD Feature: gene Location: 3911501-3914752 bp Feature: domain Description: carB Location: 3911504-3914732 bp Feature: domain Description: carB Location: 391 1 504-391 4732 bp Feature: gene Location: 3914745-3915917 bp Feature: domain Description: PRK12564 Location: 3914778-3915897 bp Feature: domain Description: PRK1 2564 Location: 391 4778-391 5897 bp Feature: gene Location: 3916191-3917882 bp Feature: domain Description: RVT_N Location: 3916248-3916488 bp Feature: domain Description: RVT_N Location: 391 6248-391 6488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3916539-3917187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 391 6539-391 71 87 bp Feature: domain Description: GIIM Note: maturase Location: 3917241-3917472 bp Feature: domain Description: GIIM Note: maturase Location: 391 7241 -391 7472 bp Feature: domain Description: HNH Note: nucleases Location: 3917718-3917853 bp Feature: domain Description: HNH Note: nucleases Location: 391 771 8-391 7853 bp Feature: gene Location: 3918956-3919780 bp Feature: domain Description: SpoU Location: 3919019-3919751 bp Feature: domain Description: SpoU Location: 391 901 9-391 9751 bp Feature: gene Location: 3919963-3920613 bp Feature: domain Description: RNase_HII_bacteria_HII_like Location: 3919966-3920488 bp Feature: domain Description: RNase_HII_bacteria_HII_like Location: 391 9966-3920488 bp Feature: gene Location: 4004796-4006379 bp Feature: domain Description: PRK10700 Location: 4005276-4006002 bp Feature: domain Description: PRK1 0700 Location: 4005276-4006002 bp Feature: gene Location: 4006376-4007530 bp Feature: domain Description: ScpB Location: 4006391-4006901 bp Feature: domain Description: ScpB Location: 4006391 -4006901 bp Feature: gene Location: 4007775-4009478 bp Feature: domain Description: RVT_N Location: 4007832-4008072 bp Feature: domain Description: RVT_N Location: 4007832-4008072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4008123-4008771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40081 23-4008771 bp Feature: domain Description: GIIM Note: maturase Location: 4008822-4009056 bp Feature: domain Description: GIIM Note: maturase Location: 4008822-4009056 bp Feature: domain Description: HNHc Note: nucleases Location: 4009284-4009434 bp Feature: domain Description: HNHc Note: nucleases Location: 4009284-4009434 bp Feature: gene Location: 4010473-4011549 bp Feature: domain Description: RluA Location: 4010608-4011472 bp Feature: domain Description: RluA Location: 401 0608-401 1 472 bp Feature: gene Location: 4011552-4012418 bp Feature: domain Description: mltD Location: 4011594-4011690 bp Feature: domain Description: mltD Location: 401 1 594-401 1 690 bp Feature: domain Description: nlpD Location: 4011735-4011867 bp Feature: domain Description: nlpD Location: 401 1 735-401 1 867 bp Feature: domain Description: nlpD Location: 4011948-4012416 bp Feature: domain Description: nlpD Location: 401 1 948-401 241 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT carB (PRK12815), PRK12564 (carbamoyl-phosphate synthase small subunit), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), SpoU (COG0566), RNase_HII_bacteria_HII_like (cd07182), PRK10700 (23S rRNA pseudouridine(2605) synthase RluB), ScpB (COG1386)
HNHc (smart00507), RluA (COG0564), mltD (PRK10783), nlpD (PRK10871)