myRT

myRT report for GCA_014168535.1_ASM1416853v1

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Seq: CP060007.1 Lacibacter sp. S13-6-6 chromosome, complete genome (5119652 bp)
Overview 1 RT 1: 4695724-4709125 bp 2 RT 2: 4727268-4735401 bp Neighborhood of RT #1 [4695724, 4709742] DUF262 DUF262 KOG0871 RVT-UG5 YeeA DEXDc_RapA PRK04914 Neighborhood of RT #2 [4727268, 4735406] DnaB RVT-Retrons REC ZnMc_pappalysin_like CARDB CARDB Por_Secre_tail Feature: gene Location: 4695724-4698075 bp Ori: QNA44294.1 Feature: domain Description: DUF262 Location: 4695754-4696435 bp Feature: domain Description: DUF262 Location: 4695754-4696435 bp Feature: gene Location: 4698072-4699790 bp Ori: QNA44295.1 Feature: domain Description: DUF262 Location: 4698117-4698687 bp Feature: domain Description: DUF262 Location: 46981 1 7-4698687 bp Feature: domain Description: KOG0871 Location: 4699050-4699233 bp Feature: domain Description: KOG0871 Location: 4699050-4699233 bp Feature: gene Location: 4699886-4702951 bp Ori: QNA44296.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4700390-4700894 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4700390-4700894 bp Feature: gene Location: 4702973-4706914 bp Ori: QNA44297.1 Feature: domain Description: YeeA Location: 4704410-4704758 bp Feature: domain Description: YeeA Location: 470441 0-4704758 bp Feature: gene Location: 4706920-4709742 bp Ori: QNA44298.1 Feature: domain Description: DEXDc_RapA Location: 4707235-4707838 bp Feature: domain Description: DEXDc_RapA Location: 4707235-4707838 bp Feature: domain Description: PRK04914 Location: 4708531-4709125 bp Feature: domain Description: PRK0491 4 Location: 4708531 -47091 25 bp Feature: gene Location: 4727268-4727981 bp Feature: gene Location: 4728270-4729733 bp Ori: QNA44312.1 Feature: domain Description: DnaB Location: 4728291-4729587 bp Feature: domain Description: DnaB Location: 4728291 -4729587 bp Feature: gene Location: 4729989-4731017 bp Ori: QNA44313.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4730148-4730733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 47301 48-4730733 bp Feature: gene Location: 4731061-4731561 bp Ori: QNA44314.1 Feature: domain Description: REC Location: 4731205-4731349 bp Feature: domain Description: REC Location: 4731 205-4731 349 bp Feature: gene Location: 4731642-4735406 bp Ori: QNA44315.1 Feature: domain Description: ZnMc_pappalysin_like Location: 4731852-4732731 bp Feature: domain Description: ZnMc_pappalysin_like Location: 4731 852-4732731 bp Feature: domain Description: CARDB Location: 4732791-4733136 bp Feature: domain Description: CARDB Location: 4732791 -47331 36 bp Feature: domain Description: CARDB Location: 4733169-4733514 bp Feature: domain Description: CARDB Location: 47331 69-473351 4 bp Feature: domain Description: Por_Secre_tail Location: 4735170-4735401 bp Feature: domain Description: Por_Secre_tail Location: 47351 70-4735401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), KOG0871 (KOG0871, Class 2 transcription repressor NC2, beta subunit (Dr1) ), RVT-UG5, YeeA (COG1002), DEXDc_RapA (cd18011), PRK04914 (RNA polymerase-associated protein RapA), DnaB (TIGR00665), RVT-Retrons, REC (smart00448), ZnMc_pappalysin_like (cd04275)
CARDB (pfam07705), Por_Secre_tail (TIGR04183)