myRT

myRT report for GCA_014168635.1_ASM1416863v1

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Seq: AP021928.1 Aeromonas caviae plasmid pWP2-W18-ESBL-01_1 DNA, complete genome, strain: WP2-W18-ESBL-01 (135252 bp)
Overview 1 RT 1: 62766-75502 bp 2 RT 2: 91412-96418 bp Neighborhood of RT #1 [62766, 75507] Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Tra8 RVT-DGRs Avd_like StbD Neighborhood of RT #2 [91412, 96418] PinE Transposase_mut RVT-GII GIIM Transposase_mut Feature: gene Location: 62766-71033 bp Ori: BBQ32809.1 Feature: domain Description: Big_6 Location: 64191-64365 bp Feature: domain Description: Big_6 Location: 641 91 -64365 bp Feature: domain Description: Big_6 Location: 64782-64956 bp Feature: domain Description: Big_6 Location: 64782-64956 bp Feature: domain Description: Big_6 Location: 65643-65817 bp Feature: domain Description: Big_6 Location: 65643-6581 7 bp Feature: domain Description: Big_6 Location: 66234-66408 bp Feature: domain Description: Big_6 Location: 66234-66408 bp Feature: domain Description: Big_6 Location: 66825-66999 bp Feature: domain Description: Big_6 Location: 66825-66999 bp Feature: domain Description: Big_6 Location: 67416-67590 bp Feature: domain Description: Big_6 Location: 6741 6-67590 bp Feature: domain Description: Big_6 Location: 68007-68181 bp Feature: domain Description: Big_6 Location: 68007-681 81 bp Feature: domain Description: Big_6 Location: 68598-68772 bp Feature: domain Description: Big_6 Location: 68598-68772 bp Feature: domain Description: Big_6 Location: 69459-69633 bp Feature: domain Description: Big_6 Location: 69459-69633 bp Feature: domain Description: Big_6 Location: 70050-70224 bp Feature: domain Description: Big_6 Location: 70050-70224 bp Feature: gene Location: 72129-72635 bp Ori: BBQ32810.1 Feature: domain Description: Tra8 Location: 72135-72597 bp Feature: domain Description: Tra8 Location: 721 35-72597 bp Feature: gene Location: 73501-74403 bp Ori: BBQ32811.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 73684-74380 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 73684-74380 bp Feature: gene Location: 74413-74799 bp Ori: BBQ32812.1 Feature: domain Description: Avd_like Location: 74446-74773 bp Feature: domain Description: Avd_like Location: 74446-74773 bp Feature: gene Location: 75262-75507 bp Ori: BBQ32813.1 Feature: domain Description: StbD Location: 75265-75502 bp Feature: domain Description: StbD Location: 75265-75502 bp Feature: gene Location: 91412-91879 bp Ori: BBQ32831.1 Feature: domain Description: PinE Location: 91424-91835 bp Feature: domain Description: PinE Location: 91 424-91 835 bp Feature: gene Location: 92169-93422 bp Ori: BBQ32832.1 Feature: domain Description: Transposase_mut Location: 92211-93327 bp Feature: domain Description: Transposase_mut Location: 9221 1 -93327 bp Feature: gene Location: 93287-94480 bp Ori: BBQ32833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93479-94097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93479-94097 bp Feature: domain Description: GIIM Note: maturase Location: 94148-94322 bp Feature: domain Description: GIIM Note: maturase Location: 941 48-94322 bp Feature: gene Location: 94818-96071 bp Ori: BBQ32834.1 Feature: domain Description: Transposase_mut Location: 94860-95976 bp Feature: domain Description: Transposase_mut Location: 94860-95976 bp Feature: gene Location: 96263-96418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Big_6 (pfam17936), Tra8 (COG2826), RVT-DGRs, Avd_like (cd16376), StbD (COG2161), PinE (COG1961), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388)