myRT

myRT report for GCA_014168655.1_ASM1416865v1

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Seq: AP021929.1 Klebsiella pneumoniae DNA, complete genome, strain: WP2-W18-ESBL-06 (5112458 bp)
Overview 1 RT 1: 4004474-4008925 bp Neighborhood of RT #1 [4004474, 4008996] INT_P4_C RVT-Retrons Pox_D5 McrA Feature: gene Location: 4004474-4005220 bp Ori: BBQ36603.1 Feature: domain Description: INT_P4_C Location: 4004690-4005209 bp Feature: domain Description: INT_P4_C Location: 4004690-4005209 bp Feature: gene Location: 4005427-4006101 bp Feature: gene Location: 4006102-4007598 bp Ori: BBQ36605.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4006807-4007362 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4006807-4007362 bp Feature: gene Location: 4007641-4007922 bp Ori: BBQ36606.1 Feature: domain Description: Pox_D5 Location: 4007716-4007896 bp Feature: domain Description: Pox_D5 Location: 400771 6-4007896 bp Feature: gene Location: 4008163-4008996 bp Ori: BBQ36607.1 Gene: mcrA Feature: domain Description: McrA Location: 4008286-4008925 bp Feature: domain Description: McrA Location: 4008286-4008925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), RVT-Retrons, Pox_D5 (pfam03288), McrA (COG4058)

Seq: AP021931.1 Klebsiella pneumoniae plasmid pWP2-W18-ESBL-06_2 DNA, complete genome, strain: WP2-W18-ESBL-06 (130287 bp)
Overview 1 RT 1: 54330-59684 bp Neighborhood of RT #1 [54330, 59821] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 54330-55601 bp Ori: BBQ37779.1 Feature: domain Description: umuC Location: 54333-55593 bp Feature: domain Description: umuC Location: 54333-55593 bp Feature: gene Location: 55601-56032 bp Ori: BBQ37780.1 Feature: domain Description: PRK10276 Location: 55652-56015 bp Feature: domain Description: PRK102 76 Location: 55652 -56015 bp Feature: gene Location: 56440-57927 bp Ori: BBQ37781.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56845-57535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56845-57535 bp Feature: gene Location: 58176-59147 bp Ori: BBQ37782.1 Feature: domain Description: StbA Location: 58179-59124 bp Feature: domain Description: StbA Location: 58179-5912 4 bp Feature: gene Location: 59150-59821 bp Ori: BBQ37783.1 Feature: domain Description: Plasmid_stab_B Location: 59165-59372 bp Feature: domain Description: Plasmid_stab_B Location: 59165-59372 bp Feature: domain Description: Plasmid_stab_B Location: 59477-59684 bp Feature: domain Description: Plasmid_stab_B Location: 59477-59684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)