myRT

myRT report for GCA_014168775.1_ASM1416877v1

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Seq: AP021963.1 Escherichia coli DNA, complete genome, strain: WP3-W18-CRE-03 (5054263 bp)
Overview 1 RT 1: 1525971-1534555 bp 2 RT 2: 4465826-4471163 bp Neighborhood of RT #1 [1525971, 1534797] AidA AidA YeeP RVT-UG1 GerD Neighborhood of RT #2 [4465826, 4471171] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Feature: gene Location: 1525971-1528817 bp Ori: BBQ72548.1 Feature: domain Description: AidA Location: 1526010-1527972 bp Feature: domain Description: AidA Location: 1 52601 0-1 527972 bp Feature: domain Description: AidA Location: 1528011-1528422 bp Feature: domain Description: AidA Location: 1 52801 1 -1 528422 bp Feature: gene Location: 1529190-1530062 bp Ori: BBQ72549.1 Feature: domain Description: YeeP Location: 1529193-1530060 bp Feature: domain Description: YeeP Location: 1 5291 93-1 530060 bp Feature: gene Location: 1530666-1533137 bp Ori: BBQ72550.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1531278-1531788 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1 531 278-1 531 788 bp Feature: gene Location: 1533371-1534354 bp Feature: gene Location: 1534363-1534797 bp Ori: BBQ72552.1 Feature: domain Description: GerD Location: 1534441-1534555 bp Feature: domain Description: GerD Location: 1 534441 -1 534555 bp Feature: gene Location: 4465826-4466743 bp Ori: BBQ75320.1 Feature: domain Description: PFLE_PFLC Location: 4465862-4466717 bp Feature: domain Description: PFLE_PFLC Location: 4465862-446671 7 bp Feature: gene Location: 4466880-4467785 bp Feature: gene Location: 4468271-4468810 bp Ori: BBQ75322.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4468601-4468679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4468601 -4468679 bp Feature: gene Location: 4468877-4469359 bp Ori: BBQ75323.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4468886-4469126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4468886-44691 26 bp Feature: domain Description: GIIM Note: maturase Location: 4469174-4469354 bp Feature: domain Description: GIIM Note: maturase Location: 44691 74-4469354 bp Feature: gene Location: 4469681-4469869 bp Feature: gene Location: 4469942-4471171 bp Ori: BBQ75325.1 Feature: domain Description: YesM Location: 4470422-4471163 bp Feature: domain Description: YesM Location: 4470422-4471 1 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AidA (COG3468), YeeP (COG3596), RVT-UG1, GerD (pfam17898), PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972)

Seq: AP021964.1 Escherichia coli plasmid pWP3-W18-CRE-03_1 DNA, complete genome, strain: WP3-W18-CRE-03 (105095 bp)
Overview 1 RT 1: 1800-5588 bp 2 RT 2: 93856-96537 bp Neighborhood of RT #1 [1800, 5626] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [93856, 96539] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 1800-2126 bp Ori: BBQ75850.1 Feature: domain Description: InsE Location: 1803-2124 bp Feature: domain Description: InsE Location: 1803-2 12 4 bp Feature: gene Location: 2126-2605 bp Ori: BBQ75851.1 Feature: domain Description: PHA02517 Location: 2186-2540 bp Feature: domain Description: PHA02 517 Location: 2 186-2 540 bp Feature: gene Location: 3197-4720 bp Ori: BBQ75852.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3470-4202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3470-42 02 bp Feature: domain Description: GIIM Note: maturase Location: 4277-4475 bp Feature: domain Description: GIIM Note: maturase Location: 42 77-4475 bp Feature: gene Location: 4837-5193 bp Ori: BBQ75853.1 Feature: domain Description: PHA02517 Location: 4840-5149 bp Feature: domain Description: PHA02 517 Location: 4840-5149 bp Feature: gene Location: 5222-5626 bp Ori: BBQ75854.1 Feature: domain Description: InsE Location: 5252-5588 bp Feature: domain Description: InsE Location: 52 52 -5588 bp Feature: gene Location: 93856-94305 bp Ori: BBQ75957.1 Feature: domain Description: PRK10173 Location: 93859-94297 bp Feature: domain Description: PRK10173 Location: 93859-942 97 bp Feature: gene Location: 94280-94600 bp Ori: BBQ75958.1 Feature: domain Description: PRK10173 Location: 94283-94511 bp Feature: domain Description: PRK10173 Location: 942 83-94511 bp Feature: gene Location: 94639-95142 bp Ori: BBQ75959.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94912-94981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94912 -94981 bp Feature: gene Location: 95734-96213 bp Ori: BBQ75960.1 Feature: domain Description: PHA02517 Location: 95794-96148 bp Feature: domain Description: PHA02 517 Location: 95794-96148 bp Feature: gene Location: 96213-96539 bp Ori: BBQ75961.1 Feature: domain Description: InsE Location: 96216-96537 bp Feature: domain Description: InsE Location: 962 16-96537 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)