myRT

myRT report for GCA_014168835.1_ASM1416883v1

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Seq: AP021998.1 Escherichia coli DNA, complete genome, strain: WP3-W18-ESBL-07 (5016643 bp)
Overview 1 RT 1: 2792024-2797738 bp Neighborhood of RT #1 [2792024, 2797746] InsA DDE_Tnp_IS1 RVT-Retrons PRK11388 Feature: gene Location: 2792024-2792299 bp Ori: BBQ95512.1 Gene: insA3 Feature: domain Description: InsA Location: 2792030-2792294 bp Feature: domain Description: InsA Location: 2792030-2792294 bp Feature: gene Location: 2792344-2792721 bp Ori: BBQ95513.1 Feature: domain Description: DDE_Tnp_IS1 Location: 2792347-2792719 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2792347-279271 9 bp Feature: gene Location: 2792778-2794535 bp Ori: BBQ95514.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2792922-2793540 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2792922-2793540 bp Feature: gene Location: 2795106-2795345 bp Feature: gene Location: 2795827-2797746 bp Ori: BBQ95516.1 Feature: domain Description: PRK11388 Location: 2795830-2797738 bp Feature: domain Description: PRK1 1 388 Location: 2795830-2797738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-Retrons, PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional)

Seq: AP021999.1 Escherichia coli plasmid pWP3-W18-ESBL-07_1 DNA, complete genome, strain: WP3-W18-ESBL-07 (105864 bp)
Overview 1 RT 1: 7186-10974 bp 2 RT 2: 100008-102689 bp Neighborhood of RT #1 [7186, 11012] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [100008, 102691] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 7186-7512 bp Ori: BBQ97589.1 Feature: domain Description: InsE Location: 7189-7510 bp Feature: domain Description: InsE Location: 7189-7510 bp Feature: gene Location: 7512-7991 bp Ori: BBQ97590.1 Feature: domain Description: PHA02517 Location: 7572-7926 bp Feature: domain Description: PHA02 517 Location: 7572 -792 6 bp Feature: gene Location: 8583-10106 bp Ori: BBQ97591.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: gene Location: 10223-10579 bp Ori: BBQ97592.1 Feature: domain Description: PHA02517 Location: 10226-10535 bp Feature: domain Description: PHA02 517 Location: 102 2 6-10535 bp Feature: gene Location: 10608-11012 bp Ori: BBQ97593.1 Feature: domain Description: InsE Location: 10638-10974 bp Feature: domain Description: InsE Location: 10638-10974 bp Feature: gene Location: 100008-100457 bp Ori: BBQ97696.1 Feature: domain Description: PRK10173 Location: 100011-100449 bp Feature: domain Description: PRK10173 Location: 100011-100449 bp Feature: gene Location: 100432-100752 bp Ori: BBQ97697.1 Feature: domain Description: PRK10173 Location: 100435-100663 bp Feature: domain Description: PRK10173 Location: 100435-100663 bp Feature: gene Location: 100791-101294 bp Ori: BBQ97698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101064-101136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101064-101136 bp Feature: gene Location: 101886-102365 bp Ori: BBQ97699.1 Feature: domain Description: PHA02517 Location: 101946-102300 bp Feature: domain Description: PHA02 517 Location: 101946-102 300 bp Feature: gene Location: 102365-102691 bp Ori: BBQ97700.1 Feature: domain Description: InsE Location: 102368-102689 bp Feature: domain Description: InsE Location: 102 368-102 689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)