myRT

myRT report for GCA_014168875.1_ASM1416887v1

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Seq: AP022005.1 Klebsiella quasipneumoniae DNA, complete genome, strain: WP3-S18-CRE-02 (5426164 bp)
Overview 1 RT 1: 1448144-1454903 bp 2 RT 2: 1878893-1883678 bp 3 RT 3: 2092751-2099464 bp 4 RT 4: 2860817-2865369 bp 5 RT 5: 3259686-3264248 bp 6 RT 6: 4490293-4496558 bp 7 RT 7: 4811078-4815218 bp Neighborhood of RT #1 [1448144, 1454962] SGNH_hydrolase_peri1 PinE RVT-GII FocA Neighborhood of RT #2 [1878893, 1883678] PinE RVT-GII group_II_RT_mat Neighborhood of RT #3 [2092751, 2099655] SGNH_hydrolase_peri1 RVT-GII PRK10276 Neighborhood of RT #4 [2860817, 2865422] RVT-GII SGNH_hydrolase_peri1 Neighborhood of RT #5 [3259686, 3264301] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #6 [4490293, 4496743] SGNH_hydrolase_peri1 RVT-GII PRK10276 Neighborhood of RT #7 [4811078, 4815262] PHA02517 RVT-GII GIIM HTH_21 InsE Feature: gene Location: 1448144-1450600 bp Ori: BBR04098.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 1449569-1450547 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 1 449569-1 450547 bp Feature: gene Location: 1450692-1451240 bp Ori: BBR04099.1 Feature: domain Description: PinE Location: 1450695-1451232 bp Feature: domain Description: PinE Location: 1 450695-1 451 232 bp Feature: gene Location: 1451696-1453180 bp Ori: BBR04100.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1452098-1452788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 452098-1 452788 bp Feature: gene Location: 1453258-1453497 bp Feature: gene Location: 1454033-1454962 bp Ori: BBR04102.1 Feature: domain Description: FocA Location: 1454126-1454903 bp Feature: domain Description: FocA Location: 1 4541 26-1 454903 bp Feature: gene Location: 1878893-1880782 bp Feature: gene Location: 1880874-1881425 bp Ori: BBR04487.1 Feature: domain Description: PinE Location: 1880877-1881417 bp Feature: domain Description: PinE Location: 1 880877-1 881 41 7 bp Feature: gene Location: 1881879-1882886 bp Ori: BBR04488.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1882281-1882878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 882281 -1 882878 bp Feature: gene Location: 1882886-1883362 bp Ori: BBR04489.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1882943-1883228 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 882943-1 883228 bp Feature: gene Location: 1883439-1883678 bp Feature: gene Location: 2092751-2094046 bp Feature: gene Location: 2094061-2096844 bp Ori: BBR04709.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 2095822-2096791 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 2095822-2096791 bp Feature: gene Location: 2097537-2099021 bp Ori: BBR04710.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2097939-2098629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2097939-2098629 bp Feature: gene Location: 2099099-2099338 bp Feature: gene Location: 2099338-2099655 bp Ori: BBR04712.1 Feature: domain Description: PRK10276 Location: 2099344-2099464 bp Feature: domain Description: PRK1 0276 Location: 2099344-2099464 bp Feature: gene Location: 2860817-2861056 bp Feature: gene Location: 2861412-2861630 bp Feature: gene Location: 2861609-2861869 bp Ori: BBR05452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2861618-2861864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2861 61 8-2861 864 bp Feature: gene Location: 2862116-2862826 bp Feature: gene Location: 2863308-2865422 bp Ori: BBR05454.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 2864934-2865369 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 2864934-2865369 bp Feature: gene Location: 3259686-3260156 bp Ori: BBR05866.1 Feature: domain Description: umuC Location: 3259689-3260127 bp Feature: domain Description: umuC Location: 3259689-32601 27 bp Feature: gene Location: 3260159-3260578 bp Ori: BBR05867.1 Feature: domain Description: PRK10276 Location: 3260162-3260573 bp Feature: domain Description: PRK1 0276 Location: 32601 62-3260573 bp Feature: gene Location: 3260982-3262466 bp Ori: BBR05868.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3261384-3262074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3261 384-3262074 bp Feature: gene Location: 3262752-3262994 bp Ori: BBR05869.1 Gene: msgA Feature: domain Description: DinI Location: 3262803-3262983 bp Feature: domain Description: DinI Location: 3262803-3262983 bp Feature: gene Location: 3263165-3264301 bp Ori: BBR05870.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3263345-3264248 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3263345-3264248 bp Feature: gene Location: 4490293-4490829 bp Feature: gene Location: 4491238-4493931 bp Ori: BBR07019.1 Feature: domain Description: SGNH_hydrolase_peri1 Location: 4493446-4493878 bp Feature: domain Description: SGNH_hydrolase_peri1 Location: 4493446-4493878 bp Feature: gene Location: 4494625-4496109 bp Ori: BBR07020.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4495027-4495717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4495027-449571 7 bp Feature: gene Location: 4496187-4496426 bp Feature: gene Location: 4496426-4496743 bp Ori: BBR07022.1 Feature: domain Description: PRK10276 Location: 4496432-4496558 bp Feature: domain Description: PRK1 0276 Location: 4496432-4496558 bp Feature: gene Location: 4811078-4811443 bp Feature: gene Location: 4811858-4812286 bp Ori: BBR07307.1 Feature: domain Description: PHA02517 Location: 4811861-4812278 bp Feature: domain Description: PHA0251 7 Location: 481 1 861 -481 2278 bp Feature: gene Location: 4812397-4813920 bp Ori: BBR07308.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4812670-4813402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481 2670-481 3402 bp Feature: domain Description: GIIM Note: maturase Location: 4813477-4813675 bp Feature: domain Description: GIIM Note: maturase Location: 481 3477-481 3675 bp Feature: gene Location: 4814686-4814931 bp Ori: BBR07309.1 Feature: domain Description: HTH_21 Location: 4814764-4814923 bp Feature: domain Description: HTH_21 Location: 481 4764-481 4923 bp Feature: gene Location: 4814960-4815262 bp Ori: BBR07310.1 Feature: domain Description: InsE Location: 4814972-4815218 bp Feature: domain Description: InsE Location: 481 4972-481 521 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SGNH_hydrolase_peri1 (cd01825), PinE (COG1961), RVT-GII, FocA (COG2116), group_II_RT_mat (TIGR04416), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), PHA02517 (putative transposase OrfB; Reviewed)
GIIM (pfam08388), HTH_21 (pfam13276), InsE (COG2963)

Seq: AP022007.1 Klebsiella quasipneumoniae plasmid pWP3-S18-CRE-02_2 DNA, complete genome, strain: WP3-S18-CRE-02 (123247 bp)
Overview 1 RT 1: 12717-19815 bp Neighborhood of RT #1 [12717, 19913] DUF262 COG3547 RVT-GII GIIM InsE PHA02517 DUF2913 Feature: gene Location: 12717-14168 bp Ori: BBR08006.1 Feature: domain Description: DUF262 Location: 12777-13338 bp Feature: domain Description: DUF2 62 Location: 12 777-13338 bp Feature: gene Location: 14518-15594 bp Ori: BBR08007.1 Feature: domain Description: COG3547 Location: 14557-15478 bp Feature: domain Description: COG3547 Location: 14557-15478 bp Feature: gene Location: 16136-17659 bp Ori: BBR08008.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16409-17141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16409-17141 bp Feature: domain Description: GIIM Note: maturase Location: 17216-17414 bp Feature: domain Description: GIIM Note: maturase Location: 172 16-17414 bp Feature: gene Location: 18251-18988 bp Ori: BBR08009.1 Feature: domain Description: InsE Location: 18263-18515 bp Feature: domain Description: InsE Location: 182 63-18515 bp Feature: domain Description: PHA02517 Location: 18587-18923 bp Feature: domain Description: PHA02 517 Location: 18587-1892 3 bp Feature: gene Location: 19302-19913 bp Ori: BBR08010.1 Feature: domain Description: DUF2913 Location: 19335-19815 bp Feature: domain Description: DUF2 913 Location: 19335-19815 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), DUF2913 (pfam11140)

Seq: AP022009.1 Klebsiella quasipneumoniae plasmid pWP3-S18-CRE-02_4 DNA, complete genome, strain: WP3-S18-CRE-02 (55811 bp)
Overview 1 RT 1: 39632-44984 bp Neighborhood of RT #1 [39632, 45121] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 39632-40903 bp Ori: BBR08276.1 Feature: domain Description: umuC Location: 39635-40895 bp Feature: domain Description: umuC Location: 3 963 5-40895 bp Feature: gene Location: 40903-41334 bp Ori: BBR08277.1 Feature: domain Description: PRK10276 Location: 40951-41317 bp Feature: domain Description: PRK10276 Location: 40951-413 17 bp Feature: gene Location: 41818-43227 bp Ori: BBR08278.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42145-42835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42145-4283 5 bp Feature: gene Location: 43476-44447 bp Ori: BBR08279.1 Feature: domain Description: StbA Location: 43479-44424 bp Feature: domain Description: StbA Location: 43 479-44424 bp Feature: gene Location: 44450-45121 bp Ori: BBR08280.1 Feature: domain Description: Plasmid_stab_B Location: 44465-44672 bp Feature: domain Description: Plasmid_stab_B Location: 44465-44672 bp Feature: domain Description: Plasmid_stab_B Location: 44777-44984 bp Feature: domain Description: Plasmid_stab_B Location: 44777-44984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)