myRT

myRT report for GCA_014168915.1_ASM1416891v1

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Seq: AP022020.1 Klebsiella sp. WP3-S18-ESBL-05 DNA, complete genome, strain: WP3-S18-ESBL-05 (5122946 bp)
Overview 1 RT 1: 680051-685418 bp 2 RT 2: 1128448-1133944 bp 3 RT 3: 3952737-3958740 bp 4 RT 4: 4465131-4475144 bp Neighborhood of RT #1 [680051, 685477] InsE HTH_38 Tra8 RVT-GII GIIM PHA02517 FIDO Neighborhood of RT #2 [1128448, 1133946] RVT-Retrons IS5 PRK09664 Neighborhood of RT #3 [3952737, 3958841] scrB_fam fruct_sucro_rep RVT-GII GIIM InsE InsE Neighborhood of RT #4 [4465131, 4475176] YeeA YeeA RVT-UG5 YeeA TIGR02687 Feature: gene Location: 680051-680407 bp Ori: BBR19166.1 Gene: ykgN Feature: domain Description: InsE Location: 680063-680339 bp Feature: domain Description: InsE Location: 680063-680339 bp Feature: gene Location: 680364-681515 bp Ori: BBR19167.1 Gene: insI3 Feature: domain Description: HTH_38 Location: 680379-680487 bp Feature: domain Description: HTH_38 Location: 680379-680487 bp Feature: domain Description: Tra8 Location: 680523-681504 bp Feature: domain Description: Tra8 Location: 680523-681 504 bp Feature: gene Location: 682610-684133 bp Ori: BBR19168.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682883-683615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 682883-68361 5 bp Feature: domain Description: GIIM Note: maturase Location: 683690-683888 bp Feature: domain Description: GIIM Note: maturase Location: 683690-683888 bp Feature: gene Location: 684460-684690 bp Ori: BBR19169.1 Feature: domain Description: PHA02517 Location: 684463-684682 bp Feature: domain Description: PHA0251 7 Location: 684463-684682 bp Feature: gene Location: 684863-685477 bp Ori: BBR19170.1 Feature: domain Description: FIDO Location: 684923-685418 bp Feature: domain Description: FIDO Location: 684923-68541 8 bp Feature: gene Location: 1128448-1128831 bp Feature: gene Location: 1129030-1129692 bp Feature: gene Location: 1129682-1130863 bp Ori: BBR19592.1 Gene: rrt Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1129832-1130408 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 29832-1 1 30408 bp Feature: gene Location: 1131035-1132015 bp Ori: BBR19593.1 Gene: insH6 Feature: domain Description: IS5 Location: 1131224-1132001 bp Feature: domain Description: IS5 Location: 1 1 31 224-1 1 32001 bp Feature: gene Location: 1132699-1133946 bp Ori: BBR19594.1 Gene: tnaB Feature: domain Description: PRK09664 Location: 1132702-1133944 bp Feature: domain Description: PRK09664 Location: 1 1 32702-1 1 33944 bp Feature: gene Location: 3952737-3954137 bp Ori: BBR22226.1 Feature: domain Description: scrB_fam Location: 3952782-3954054 bp Feature: domain Description: scrB_fam Location: 3952782-3954054 bp Feature: gene Location: 3954167-3955171 bp Ori: BBR22227.1 Feature: domain Description: fruct_sucro_rep Location: 3954188-3955166 bp Feature: domain Description: fruct_sucro_rep Location: 39541 88-39551 66 bp Feature: gene Location: 3955605-3957128 bp Ori: BBR22228.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955878-3956610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3955878-395661 0 bp Feature: domain Description: GIIM Note: maturase Location: 3956685-3956883 bp Feature: domain Description: GIIM Note: maturase Location: 3956685-3956883 bp Feature: gene Location: 3958172-3958474 bp Ori: BBR22229.1 Feature: domain Description: InsE Location: 3958181-3958460 bp Feature: domain Description: InsE Location: 39581 81 -3958460 bp Feature: gene Location: 3958578-3958841 bp Ori: BBR22230.1 Feature: domain Description: InsE Location: 3958593-3958740 bp Feature: domain Description: InsE Location: 3958593-3958740 bp Feature: gene Location: 4465131-4467065 bp Ori: BBR22715.1 Feature: domain Description: YeeA Location: 4465770-4466481 bp Feature: domain Description: YeeA Location: 4465770-4466481 bp Feature: domain Description: YeeA Location: 4466637-4466961 bp Feature: domain Description: YeeA Location: 4466637-4466961 bp Feature: gene Location: 4467013-4467552 bp Feature: gene Location: 4467569-4470571 bp Ori: BBR22717.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4468031-4468520 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4468031 -4468520 bp Feature: gene Location: 4470571-4472355 bp Ori: BBR22718.1 Feature: domain Description: YeeA Location: 4470604-4472287 bp Feature: domain Description: YeeA Location: 4470604-4472287 bp Feature: gene Location: 4472573-4475176 bp Ori: BBR22719.1 Feature: domain Description: TIGR02687 Location: 4472591-4475144 bp Feature: domain Description: TIGR02687 Location: 4472591 -44751 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_38 (pfam13936), Tra8 (COG2826), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), FIDO (COG2184), RVT-Retrons, IS5 (COG3039), PRK09664 (low affinity tryptophan permease TnaB)
scrB_fam (TIGR01322), fruct_sucro_rep (TIGR02417), YeeA (COG1002), RVT-UG5, TIGR02687 (TIGR02687 family protein)

Seq: AP022021.1 Klebsiella sp. WP3-S18-ESBL-05 plasmid pWP3-S18-ESBL-05_1 DNA, complete genome, strain: WP3-S18-ESBL-05 (336188 bp)
Overview 1 RT 1: 91450-100763 bp Neighborhood of RT #1 [91450, 100837] TelA PHA02517 RVT-GII GIIM PHA02517 RVT-GII GIIM HTH_38 Tra8 InsE Feature: gene Location: 91450-92487 bp Ori: BBR23400.1 Feature: domain Description: TelA Location: 91480-92443 bp Feature: domain Description: TelA Location: 91480-92 443 bp Feature: gene Location: 92581-92973 bp Ori: BBR23401.1 Feature: domain Description: PHA02517 Location: 92587-92965 bp Feature: domain Description: PHA02 517 Location: 92 587-92 965 bp Feature: gene Location: 93138-94661 bp Ori: BBR23402.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93411-94143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93411-94143 bp Feature: domain Description: GIIM Note: maturase Location: 94218-94416 bp Feature: domain Description: GIIM Note: maturase Location: 942 18-94416 bp Feature: gene Location: 96188-96394 bp Ori: BBR23403.1 Feature: domain Description: PHA02517 Location: 96191-96365 bp Feature: domain Description: PHA02 517 Location: 96191-96365 bp Feature: gene Location: 96757-98280 bp Ori: BBR23404.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97030-97762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97030-97762 bp Feature: domain Description: GIIM Note: maturase Location: 97837-98035 bp Feature: domain Description: GIIM Note: maturase Location: 97837-98035 bp Feature: gene Location: 99373-100524 bp Ori: BBR23405.1 Gene: insI4 Feature: domain Description: HTH_38 Location: 99382-99496 bp Feature: domain Description: HTH_38 Location: 99382 -99496 bp Feature: domain Description: Tra8 Location: 99532-100513 bp Feature: domain Description: Tra8 Location: 99532 -100513 bp Feature: gene Location: 100481-100837 bp Ori: BBR23406.1 Gene: ykgN Feature: domain Description: InsE Location: 100493-100763 bp Feature: domain Description: InsE Location: 100493-100763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TelA (pfam05816), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_38 (pfam13936), Tra8 (COG2826), InsE (COG2963)