myRT

myRT report for GCA_014168955.1_ASM1416895v1

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Seq: AP022032.1 Escherichia coli DNA, complete genome, strain: WP3-S18-ESBL-08 (4949344 bp)
Overview 1 RT 1: 2725503-2731217 bp Neighborhood of RT #1 [2725503, 2731225] InsA DDE_Tnp_IS1 RVT-Retrons PRK11388 Feature: gene Location: 2725503-2725778 bp Ori: BBR30787.1 Gene: insA3 Feature: domain Description: InsA Location: 2725509-2725773 bp Feature: domain Description: InsA Location: 2725509-2725773 bp Feature: gene Location: 2725823-2726200 bp Ori: BBR30788.1 Feature: domain Description: DDE_Tnp_IS1 Location: 2725826-2726198 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2725826-27261 98 bp Feature: gene Location: 2726257-2728014 bp Ori: BBR30789.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2726401-2727019 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2726401 -272701 9 bp Feature: gene Location: 2728585-2728824 bp Feature: gene Location: 2729306-2731225 bp Ori: BBR30791.1 Feature: domain Description: PRK11388 Location: 2729309-2731217 bp Feature: domain Description: PRK1 1 388 Location: 2729309-2731 21 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-Retrons, PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional)

Seq: AP022033.1 Escherichia coli plasmid pWP3-S18-ESBL-08_1 DNA, complete genome, strain: WP3-S18-ESBL-08 (105867 bp)
Overview 1 RT 1: 7186-10974 bp 2 RT 2: 100014-102695 bp Neighborhood of RT #1 [7186, 11012] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [100014, 102697] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 7186-7512 bp Ori: BBR32863.1 Feature: domain Description: InsE Location: 7189-7510 bp Feature: domain Description: InsE Location: 7189-7510 bp Feature: gene Location: 7512-7991 bp Ori: BBR32864.1 Feature: domain Description: PHA02517 Location: 7572-7926 bp Feature: domain Description: PHA02 517 Location: 7572 -792 6 bp Feature: gene Location: 8583-10106 bp Ori: BBR32865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: gene Location: 10223-10579 bp Ori: BBR32866.1 Feature: domain Description: PHA02517 Location: 10226-10535 bp Feature: domain Description: PHA02 517 Location: 102 2 6-10535 bp Feature: gene Location: 10608-11012 bp Ori: BBR32867.1 Feature: domain Description: InsE Location: 10638-10974 bp Feature: domain Description: InsE Location: 10638-10974 bp Feature: gene Location: 100014-100463 bp Ori: BBR32970.1 Feature: domain Description: PRK10173 Location: 100017-100455 bp Feature: domain Description: PRK10173 Location: 100017-100455 bp Feature: gene Location: 100438-100758 bp Ori: BBR32971.1 Feature: domain Description: PRK10173 Location: 100441-100669 bp Feature: domain Description: PRK10173 Location: 100441-100669 bp Feature: gene Location: 100797-101300 bp Ori: BBR32972.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101070-101142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101070-101142 bp Feature: gene Location: 101892-102371 bp Ori: BBR32973.1 Feature: domain Description: PHA02517 Location: 101952-102306 bp Feature: domain Description: PHA02 517 Location: 101952 -102 306 bp Feature: gene Location: 102371-102697 bp Ori: BBR32974.1 Feature: domain Description: InsE Location: 102374-102695 bp Feature: domain Description: InsE Location: 102 374-102 695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)