myRT

myRT report for GCA_014168975.1_ASM1416897v1

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Seq: AP022037.1 Escherichia coli plasmid pWP3-S18-ESBL-09_1 DNA, complete genome, strain: WP3-S18-ESBL-09 (88528 bp)
Overview 1 RT 1: 35011-39274 bp Neighborhood of RT #1 [35011, 39276] DUF1380 RVT-GII GIIM HNHc PRK13732 Feature: gene Location: 35011-35433 bp Ori: BBR37421.1 Gene: yubJ Feature: domain Description: DUF1380 Location: 35014-35311 bp Feature: domain Description: DUF1 380 Location: 3501 4-3531 1 bp Feature: gene Location: 35430-35621 bp Feature: gene Location: 35900-37174 bp Ori: BBR37423.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35903-36485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35903-36485 bp Feature: domain Description: GIIM Note: maturase Location: 36536-36770 bp Feature: domain Description: GIIM Note: maturase Location: 36536-36770 bp Feature: domain Description: HNHc Note: nucleases Location: 36980-37139 bp Feature: domain Description: HNHc Note: nucleases Location: 36980-371 39 bp Feature: gene Location: 38202-38690 bp Feature: gene Location: 38749-39276 bp Ori: BBR37425.1 Feature: domain Description: PRK13732 Location: 38752-39274 bp Feature: domain Description: PRK1 3732 Location: 38752-39274 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1380 (pfam07128), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional)

Seq: AP022036.1 Escherichia coli DNA, complete genome, strain: WP3-S18-ESBL-09 (4769110 bp)
Overview 1 RT 1: 1149225-1156178 bp Neighborhood of RT #1 [1149225, 1156183] DinI RVT-Retrons Q P Feature: gene Location: 1149225-1149458 bp Ori: BBR34070.1 Feature: domain Description: DinI Location: 1149267-1149453 bp Feature: domain Description: DinI Location: 11492 67-1149453 bp Feature: gene Location: 1149716-1151017 bp Feature: gene Location: 1151579-1153336 bp Ori: BBR34072.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1151723-1152344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 115172 3-1152 344 bp Feature: gene Location: 1153386-1154417 bp Ori: BBR34073.1 Feature: domain Description: Q Location: 1153389-1154412 bp Feature: domain Description: Q Location: 1153389-1154412 bp Feature: gene Location: 1154417-1156183 bp Ori: BBR34074.1 Feature: domain Description: P Location: 1154444-1156178 bp Feature: domain Description: P Location: 1154444-1156178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)