myRT

myRT report for GCA_014169055.1_ASM1416905v1

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Seq: AP022055.1 Pseudomonas putida DNA, complete genome, strain: WP4-W18-CRE-03 (5467790 bp)
Overview 1 RT 1: 384726-393149 bp Neighborhood of RT #1 [384726, 393202] PRK07232 MrcA RVT-GII YkfC HNHc PilM_2 PilM PilN Feature: gene Location: 384726-385994 bp Ori: BBR52018.1 Feature: domain Description: PRK07232 Location: 384735-385944 bp Feature: domain Description: PRK07232 Location: 384735-385944 bp Feature: gene Location: 386141-388594 bp Ori: BBR52019.1 Feature: domain Description: MrcA Location: 386147-388520 bp Feature: domain Description: MrcA Location: 3861 47-388520 bp Feature: gene Location: 388724-390028 bp Ori: BBR52020.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388727-389303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 388727-389303 bp Feature: domain Description: YkfC Location: 389501-389606 bp Feature: domain Description: YkfC Location: 389501 -389606 bp Feature: domain Description: HNHc Note: nucleases Location: 389807-389972 bp Feature: domain Description: HNHc Note: nucleases Location: 389807-389972 bp Feature: gene Location: 391746-392666 bp Ori: BBR52021.1 Feature: domain Description: PilM_2 Location: 391788-392277 bp Feature: domain Description: PilM_2 Location: 391 788-392277 bp Feature: domain Description: PilM Location: 392520-392655 bp Feature: domain Description: PilM Location: 392520-392655 bp Feature: gene Location: 392666-393202 bp Ori: BBR52022.1 Feature: domain Description: PilN Location: 392675-393149 bp Feature: domain Description: PilN Location: 392675-3931 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07232 (bifunctional malic enzyme oxidoreductase/phosphotransacetylase; Reviewed), MrcA (COG5009), RVT-GII, YkfC (COG3344), HNHc (smart00507), PilM_2 (pfam11104), PilM (pfam07419), PilN (pfam05137)