myRT

myRT report for GCA_014169075.1_ASM1416907v1

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Seq: AP022058.1 Klebsiella sp. WP4-W18-ESBL-05 plasmid pWP4-W18-ESBL-05_1 DNA, complete genome, strain: WP4-W18-ESBL-05 (171435 bp)
Overview 1 RT 1: 91048-95042 bp Neighborhood of RT #1 [91048, 95047] InsE PHA02517 RVT-GII GIIM PHA02517 PRK09409 Feature: gene Location: 91048-91332 bp Ori: BBR61389.1 Feature: domain Description: InsE Location: 91060-91321 bp Feature: domain Description: InsE Location: 91 060-91 321 bp Feature: gene Location: 91374-91799 bp Ori: BBR61390.1 Feature: domain Description: PHA02517 Location: 91395-91734 bp Feature: domain Description: PHA0251 7 Location: 91 395-91 734 bp Feature: gene Location: 92391-93914 bp Ori: BBR61391.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92664-93396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92664-93396 bp Feature: domain Description: GIIM Note: maturase Location: 93471-93669 bp Feature: domain Description: GIIM Note: maturase Location: 93471 -93669 bp Feature: gene Location: 94079-94453 bp Ori: BBR61392.1 Feature: domain Description: PHA02517 Location: 94103-94445 bp Feature: domain Description: PHA0251 7 Location: 941 03-94445 bp Feature: gene Location: 94481-95047 bp Ori: BBR61393.1 Feature: domain Description: PRK09409 Location: 94532-95042 bp Feature: domain Description: PRK09409 Location: 94532-95042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK09409 (IS2 transposase TnpB; Reviewed)

Seq: AP022057.1 Klebsiella sp. WP4-W18-ESBL-05 DNA, complete genome, strain: WP4-W18-ESBL-05 (4990424 bp)
Overview 1 RT 1: 1032562-1039114 bp 2 RT 2: 4377344-4382153 bp Neighborhood of RT #1 [1032562, 1039197] HTH_38 Tra8 PHA02517 RVT-GII GIIM fruct_sucro_rep scrB_fam Neighborhood of RT #2 [4377344, 4382164] SH3_3 PHA02517 RVT-GII GIIM PHA02517 HTH_38 Tra8 Feature: gene Location: 1032562-1033713 bp Ori: BBR57625.1 Gene: insI4 Feature: domain Description: HTH_38 Location: 1032571-1032685 bp Feature: domain Description: HTH_38 Location: 1032 571-1032 685 bp Feature: domain Description: Tra8 Location: 1032721-1033702 bp Feature: domain Description: Tra8 Location: 1032 72 1-1033702 bp Feature: gene Location: 1033975-1034214 bp Ori: BBR57626.1 Feature: domain Description: PHA02517 Location: 1033978-1034149 bp Feature: domain Description: PHA02 517 Location: 1033978-1034149 bp Feature: gene Location: 1034806-1036329 bp Ori: BBR57627.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035079-1035811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1035079-1035811 bp Feature: domain Description: GIIM Note: maturase Location: 1035886-1036084 bp Feature: domain Description: GIIM Note: maturase Location: 1035886-1036084 bp Feature: gene Location: 1036763-1037767 bp Ori: BBR57628.1 Feature: domain Description: fruct_sucro_rep Location: 1036784-1037762 bp Feature: domain Description: fruct_sucro_rep Location: 1036784-1037762 bp Feature: gene Location: 1037797-1039197 bp Ori: BBR57629.1 Feature: domain Description: scrB_fam Location: 1037842-1039114 bp Feature: domain Description: scrB_fam Location: 1037842 -1039114 bp Feature: gene Location: 4377344-4377838 bp Ori: BBR60757.1 Feature: domain Description: SH3_3 Location: 4377563-4377707 bp Feature: domain Description: SH3_3 Location: 4377563-4377707 bp Feature: gene Location: 4377773-4378177 bp Ori: BBR60758.1 Feature: domain Description: PHA02517 Location: 4377776-4378157 bp Feature: domain Description: PHA02 517 Location: 4377776-4378157 bp Feature: gene Location: 4378342-4379865 bp Ori: BBR60759.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4378615-4379347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4378615-4379347 bp Feature: domain Description: GIIM Note: maturase Location: 4379422-4379620 bp Feature: domain Description: GIIM Note: maturase Location: 437942 2 -437962 0 bp Feature: gene Location: 4380457-4380720 bp Ori: BBR60760.1 Feature: domain Description: PHA02517 Location: 4380463-4380655 bp Feature: domain Description: PHA02 517 Location: 4380463-4380655 bp Feature: gene Location: 4381013-4382164 bp Ori: BBR60761.1 Gene: insI4 Feature: domain Description: HTH_38 Location: 4381022-4381136 bp Feature: domain Description: HTH_38 Location: 438102 2 -4381136 bp Feature: domain Description: Tra8 Location: 4381172-4382153 bp Feature: domain Description: Tra8 Location: 4381172 -4382 153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fruct_sucro_rep (TIGR02417), scrB_fam (TIGR01322), SH3_3 (pfam08239)