myRT

myRT report for GCA_014169095.1_ASM1416909v1

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Seq: AP022065.1 Escherichia coli plasmid pWP4-W18-ESBL-08_1 DNA, complete genome, strain: WP4-W18-ESBL-08 (134864 bp)
Overview 1 RT 1: 7186-10974 bp 2 RT 2: 129011-131692 bp Neighborhood of RT #1 [7186, 11012] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #2 [129011, 131694] PRK10173 PRK10173 RVT-GII PHA02517 InsE Feature: gene Location: 7186-7512 bp Ori: BBR66213.1 Feature: domain Description: InsE Location: 7189-7510 bp Feature: domain Description: InsE Location: 71 89-751 0 bp Feature: gene Location: 7512-7991 bp Ori: BBR66214.1 Feature: domain Description: PHA02517 Location: 7572-7926 bp Feature: domain Description: PHA0251 7 Location: 7572-7926 bp Feature: gene Location: 8583-10106 bp Ori: BBR66215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8856-9588 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: domain Description: GIIM Note: maturase Location: 9663-9861 bp Feature: gene Location: 10223-10579 bp Ori: BBR66216.1 Feature: domain Description: PHA02517 Location: 10226-10535 bp Feature: domain Description: PHA0251 7 Location: 1 0226-1 0535 bp Feature: gene Location: 10608-11012 bp Ori: BBR66217.1 Feature: domain Description: InsE Location: 10638-10974 bp Feature: domain Description: InsE Location: 1 0638-1 0974 bp Feature: gene Location: 129011-129460 bp Ori: BBR66348.1 Feature: domain Description: PRK10173 Location: 129014-129452 bp Feature: domain Description: PRK1 01 73 Location: 1 2901 4-1 29452 bp Feature: gene Location: 129435-129755 bp Ori: BBR66349.1 Feature: domain Description: PRK10173 Location: 129438-129666 bp Feature: domain Description: PRK1 01 73 Location: 1 29438-1 29666 bp Feature: gene Location: 129794-130297 bp Ori: BBR66350.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130067-130139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30067-1 301 39 bp Feature: gene Location: 130889-131368 bp Ori: BBR66351.1 Feature: domain Description: PHA02517 Location: 130949-131303 bp Feature: domain Description: PHA0251 7 Location: 1 30949-1 31 303 bp Feature: gene Location: 131368-131694 bp Ori: BBR66352.1 Feature: domain Description: InsE Location: 131371-131692 bp Feature: domain Description: InsE Location: 1 31 371 -1 31 692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: AP022064.1 Escherichia coli DNA, complete genome, strain: WP4-W18-ESBL-08 (4972339 bp)
Overview 1 RT 1: 2033866-2040208 bp Neighborhood of RT #1 [2033866, 2040208] PRK11388 RVT-Retrons Feature: gene Location: 2033866-2035785 bp Ori: BBR63508.1 Feature: domain Description: PRK11388 Location: 2033869-2035777 bp Feature: domain Description: PRK11388 Location: 2 033869-2 035777 bp Feature: gene Location: 2036267-2036506 bp Feature: gene Location: 2037077-2038834 bp Ori: BBR63510.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2037221-2037839 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0372 2 1-2 037839 bp Feature: gene Location: 2038856-2039023 bp Feature: gene Location: 2039081-2040208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons