myRT

myRT report for GCA_014169175.1_ASM1416917v1

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Seq: AP022098.1 Escherichia coli DNA, complete genome, strain: WP4-S18-ESBL-09 (5142974 bp)
Overview 1 RT 1: 96419-100301 bp 2 RT 2: 870199-875584 bp 3 RT 3: 1993195-1999037 bp Neighborhood of RT #1 [96419, 100306] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [870199, 875610] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Neighborhood of RT #3 [1993195, 1999072] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 96419-97135 bp Ori: BBR96052.1 Gene: rph Feature: domain Description: rph Location: 96422-97130 bp Feature: domain Description: rph Location: 96422-971 30 bp Feature: gene Location: 97201-97842 bp Ori: BBR96053.1 Gene: pyrE Feature: domain Description: pyrE Location: 97204-97837 bp Feature: domain Description: pyrE Location: 97204-97837 bp Feature: gene Location: 98140-99099 bp Ori: BBR96054.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98275-98824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98275-98824 bp Feature: gene Location: 99145-99741 bp Ori: BBR96055.1 Gene: slmA Feature: domain Description: slmA Location: 99151-99727 bp Feature: domain Description: slmA Location: 991 51 -99727 bp Feature: gene Location: 99848-100306 bp Ori: BBR96056.1 Gene: dut Feature: domain Description: dut Location: 99854-100301 bp Feature: domain Description: dut Location: 99854-1 00301 bp Feature: gene Location: 870199-871428 bp Ori: BBR96795.1 Feature: domain Description: YesM Location: 870679-871420 bp Feature: domain Description: YesM Location: 870679-871 420 bp Feature: gene Location: 871501-871689 bp Feature: gene Location: 872077-872559 bp Ori: BBR96797.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872086-872326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872086-872326 bp Feature: domain Description: GIIM Note: maturase Location: 872374-872554 bp Feature: domain Description: GIIM Note: maturase Location: 872374-872554 bp Feature: gene Location: 872626-873165 bp Ori: BBR96798.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872956-873034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872956-873034 bp Feature: gene Location: 873651-874556 bp Feature: gene Location: 874693-875610 bp Ori: BBR96800.1 Feature: domain Description: PFLE_PFLC Location: 874729-875584 bp Feature: domain Description: PFLE_PFLC Location: 874729-875584 bp Feature: gene Location: 1993195-1993473 bp Ori: BBR97804.1 Feature: domain Description: DUF5339 Location: 1993258-1993459 bp Feature: domain Description: DUF5339 Location: 1 993258-1 993459 bp Feature: gene Location: 1993811-1994842 bp Ori: BBR97805.1 Gene: ansA Feature: domain Description: Asparaginase_2 Location: 1993901-1994834 bp Feature: domain Description: Asparaginase_2 Location: 1 993901 -1 994834 bp Feature: gene Location: 1995366-1995812 bp Ori: BBR97806.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1995672-1995774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 995672-1 995774 bp Feature: gene Location: 1996458-1997819 bp Ori: BBR97807.1 Feature: domain Description: DcuC Location: 1996461-1997793 bp Feature: domain Description: DcuC Location: 1 996461 -1 997793 bp Feature: gene Location: 1997816-1999072 bp Ori: BBR97808.1 Feature: domain Description: PRK13381 Location: 1997822-1999037 bp Feature: domain Description: PRK1 3381 Location: 1 997822-1 999037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), DUF5339 (pfam17274)
Asparaginase_2 (pfam01112), DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)