myRT

myRT report for GCA_014169235.1_ASM1416923v1

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Seq: AP022111.1 Aeromonas caviae plasmid pWP5-W18-ESBL-02_1 DNA, complete genome, strain: WP5-W18-ESBL-02 (147986 bp)
Overview 1 RT 1: 70499-74934 bp 2 RT 2: 88530-102902 bp Neighborhood of RT #1 [70499, 74960] PinE Transposase_mut RVT-GII GIIM Transposase_mut group_II_RT_mat Neighborhood of RT #2 [88530, 105022] StbD Avd_like RVT-DGRs Tra8 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Big_6 Feature: gene Location: 70499-70966 bp Ori: BBS19409.1 Feature: domain Description: PinE Location: 70511-70922 bp Feature: domain Description: PinE Location: 7051 1 -70922 bp Feature: gene Location: 71256-72509 bp Ori: BBS19410.1 Feature: domain Description: Transposase_mut Location: 71298-72414 bp Feature: domain Description: Transposase_mut Location: 71 298-7241 4 bp Feature: gene Location: 72374-73303 bp Ori: BBS19411.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72380-72920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72380-72920 bp Feature: domain Description: GIIM Note: maturase Location: 72971-73145 bp Feature: domain Description: GIIM Note: maturase Location: 72971 -731 45 bp Feature: gene Location: 73547-74800 bp Ori: BBS19412.1 Feature: domain Description: Transposase_mut Location: 73589-74705 bp Feature: domain Description: Transposase_mut Location: 73589-74705 bp Feature: gene Location: 74802-74960 bp Ori: BBS19413.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 74826-74934 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 74826-74934 bp Feature: gene Location: 88530-88775 bp Ori: BBS19426.1 Feature: domain Description: StbD Location: 88533-88770 bp Feature: domain Description: StbD Location: 88533-88770 bp Feature: gene Location: 89238-89624 bp Ori: BBS19427.1 Feature: domain Description: Avd_like Location: 89271-89598 bp Feature: domain Description: Avd_like Location: 89271 -89598 bp Feature: gene Location: 89634-90926 bp Ori: BBS19428.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 89817-90513 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8981 7-9051 3 bp Feature: gene Location: 91097-91603 bp Ori: BBS19429.1 Feature: domain Description: Tra8 Location: 91103-91565 bp Feature: domain Description: Tra8 Location: 91 1 03-91 565 bp Feature: gene Location: 92699-105022 bp Ori: BBS19430.1 Feature: domain Description: Big_6 Location: 93797-93971 bp Feature: domain Description: Big_6 Location: 93797-93971 bp Feature: domain Description: Big_6 Location: 94928-95102 bp Feature: domain Description: Big_6 Location: 94928-951 02 bp Feature: domain Description: Big_6 Location: 96059-96233 bp Feature: domain Description: Big_6 Location: 96059-96233 bp Feature: domain Description: Big_6 Location: 97190-97364 bp Feature: domain Description: Big_6 Location: 971 90-97364 bp Feature: domain Description: Big_6 Location: 98051-98225 bp Feature: domain Description: Big_6 Location: 98051 -98225 bp Feature: domain Description: Big_6 Location: 98642-98816 bp Feature: domain Description: Big_6 Location: 98642-9881 6 bp Feature: domain Description: Big_6 Location: 99503-99677 bp Feature: domain Description: Big_6 Location: 99503-99677 bp Feature: domain Description: Big_6 Location: 100364-100538 bp Feature: domain Description: Big_6 Location: 1 00364-1 00538 bp Feature: domain Description: Big_6 Location: 100955-101129 bp Feature: domain Description: Big_6 Location: 1 00955-1 01 1 29 bp Feature: domain Description: Big_6 Location: 101546-101720 bp Feature: domain Description: Big_6 Location: 1 01 546-1 01 720 bp Feature: domain Description: Big_6 Location: 102137-102311 bp Feature: domain Description: Big_6 Location: 1 021 37-1 0231 1 bp Feature: domain Description: Big_6 Location: 102728-102902 bp Feature: domain Description: Big_6 Location: 1 02728-1 02902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Transposase_mut (pfam00872), RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), StbD (COG2161), Avd_like (cd16376), RVT-DGRs, Tra8 (COG2826), Big_6 (pfam17936)

Seq: AP022110.1 Aeromonas caviae DNA, complete genome, strain: WP5-W18-ESBL-02 (4751792 bp)
Overview 1 RT 1: 26146-29867 bp Neighborhood of RT #1 [26146, 29867] zf-IS66 DDE_Tnp_IS66 Tra5 RVT-Retrons Feature: gene Location: 26146-27564 bp Ori: BBS14987.1 Feature: domain Description: zf-IS66 Location: 26434-26566 bp Feature: domain Description: zf-IS66 Location: 2 6434-2 6566 bp Feature: domain Description: DDE_Tnp_IS66 Location: 26611-27415 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 6611-2 7415 bp Feature: gene Location: 27620-28216 bp Ori: BBS14988.1 Feature: domain Description: Tra5 Location: 27668-28049 bp Feature: domain Description: Tra5 Location: 2 7668-2 8049 bp Feature: gene Location: 28213-28887 bp Ori: BBS14989.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28435-28846 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8435-2 8846 bp Feature: gene Location: 28892-29077 bp Feature: gene Location: 29070-29867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), Tra5 (COG2801), RVT-Retrons