myRT

myRT report for GCA_014169255.1_ASM1416925v1

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Seq: AP022112.1 Klebsiella quasipneumoniae DNA, complete genome, strain: WP5-W18-ESBL-06 (5491903 bp)
Overview 1 RT 1: 823772-830927 bp Neighborhood of RT #1 [823772, 830929] COG3904 TPR PRK09413 RVT-GII GIIM PHA02517 COG4930 Feature: gene Location: 823772-824746 bp Ori: BBS20237.1 Feature: domain Description: COG3904 Location: 823802-824219 bp Feature: domain Description: COG3904 Location: 823802-82421 9 bp Feature: domain Description: TPR Location: 824336-824606 bp Feature: domain Description: TPR Location: 824336-824606 bp Feature: gene Location: 824924-825202 bp Ori: BBS20238.1 Feature: domain Description: PRK09413 Location: 824927-825197 bp Feature: domain Description: PRK0941 3 Location: 824927-8251 97 bp Feature: gene Location: 826087-827610 bp Ori: BBS20239.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826360-827092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 826360-827092 bp Feature: domain Description: GIIM Note: maturase Location: 827206-827365 bp Feature: domain Description: GIIM Note: maturase Location: 827206-827365 bp Feature: gene Location: 827787-828152 bp Ori: BBS20240.1 Feature: domain Description: PHA02517 Location: 827790-828144 bp Feature: domain Description: PHA0251 7 Location: 827790-8281 44 bp Feature: gene Location: 828845-830929 bp Ori: BBS20241.1 Feature: domain Description: COG4930 Location: 828881-830927 bp Feature: domain Description: COG4930 Location: 828881 -830927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3904 (Predicted periplasmic protein ), TPR (smart00028), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG4930 (Predicted ATP-dependent Lon-type protease )

Seq: AP022113.1 Klebsiella quasipneumoniae plasmid pWP5-W18-ESBL-06_1 DNA, complete genome, strain: WP5-W18-ESBL-06 (190538 bp)
Overview 1 RT 1: 74369-79711 bp Neighborhood of RT #1 [74369, 79848] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 74369-75640 bp Ori: BBS24646.1 Gene: samB Feature: domain Description: umuC Location: 74372-75635 bp Feature: domain Description: umuC Location: 74372 -75635 bp Feature: gene Location: 75640-76065 bp Ori: BBS24647.1 Feature: domain Description: PRK10276 Location: 75643-76051 bp Feature: domain Description: PRK102 76 Location: 75643-76051 bp Feature: gene Location: 76471-77955 bp Ori: BBS24648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76873-77563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76873-77563 bp Feature: gene Location: 78204-79007 bp Ori: BBS24649.1 Feature: domain Description: StbA Location: 78207-78996 bp Feature: domain Description: StbA Location: 782 07-78996 bp Feature: gene Location: 79177-79848 bp Ori: BBS24650.1 Feature: domain Description: Plasmid_stab_B Location: 79192-79399 bp Feature: domain Description: Plasmid_stab_B Location: 79192 -79399 bp Feature: domain Description: Plasmid_stab_B Location: 79504-79711 bp Feature: domain Description: Plasmid_stab_B Location: 79504-79711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: AP022114.1 Klebsiella quasipneumoniae plasmid pWP5-W18-ESBL-06_2 DNA, complete genome, strain: WP5-W18-ESBL-06 (120877 bp)
Overview 1 RT 1: 61229-65702 bp 2 RT 2: 113370-118992 bp Neighborhood of RT #1 [61229, 65767] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Neighborhood of RT #2 [113370, 119090] PHA02517 COG3547 RVT-GII GIIM InsE PHA02517 DUF2913 Feature: gene Location: 61229-61900 bp Ori: BBS24835.1 Feature: domain Description: Plasmid_stab_B Location: 61244-61451 bp Feature: domain Description: Plasmid_stab_B Location: 61244-61451 bp Feature: domain Description: Plasmid_stab_B Location: 61556-61763 bp Feature: domain Description: Plasmid_stab_B Location: 61556-61763 bp Feature: gene Location: 61903-62874 bp Ori: BBS24836.1 Feature: domain Description: StbA Location: 61906-62851 bp Feature: domain Description: StbA Location: 61906-62851 bp Feature: gene Location: 63123-64532 bp Ori: BBS24837.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63450-64140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63 450-64140 bp Feature: gene Location: 65016-65447 bp Ori: BBS24838.1 Feature: domain Description: PRK10276 Location: 65064-65430 bp Feature: domain Description: PRK10276 Location: 65064-6543 0 bp Feature: gene Location: 65447-65767 bp Ori: BBS24839.1 Feature: domain Description: umuC Location: 65450-65702 bp Feature: domain Description: umuC Location: 65450-65702 bp Feature: gene Location: 113370-113576 bp Ori: BBS24874.1 Feature: domain Description: PHA02517 Location: 113373-113565 bp Feature: domain Description: PHA02517 Location: 113 3 73 -113 565 bp Feature: gene Location: 113695-114771 bp Ori: BBS24875.1 Feature: domain Description: COG3547 Location: 113734-114655 bp Feature: domain Description: COG3 547 Location: 113 73 4-114655 bp Feature: gene Location: 115313-116836 bp Ori: BBS24876.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115586-116318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 115586-1163 18 bp Feature: domain Description: GIIM Note: maturase Location: 116393-116591 bp Feature: domain Description: GIIM Note: maturase Location: 1163 93 -116591 bp Feature: gene Location: 117428-118165 bp Ori: BBS24877.1 Feature: domain Description: InsE Location: 117440-117692 bp Feature: domain Description: InsE Location: 117440-117692 bp Feature: domain Description: PHA02517 Location: 117764-118100 bp Feature: domain Description: PHA02517 Location: 117764-118100 bp Feature: gene Location: 118479-119090 bp Ori: BBS24878.1 Feature: domain Description: DUF2913 Location: 118512-118992 bp Feature: domain Description: DUF2913 Location: 118512-118992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), GIIM (pfam08388), InsE (COG2963), DUF2913 (pfam11140)