myRT

myRT report for GCA_014169295.1_ASM1416929v1

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Seq: AP022127.1 Enterobacter cloacae plasmid pWP5-S18-CRE-02_1 DNA, complete genome, strain: WP5-S18-CRE-02 (207601 bp)
Overview 1 RT 1: 137134-142352 bp Neighborhood of RT #1 [137134, 142352] InsE HTH_38 Tra8 RVT-GII GIIM PHA02517 Feature: gene Location: 137134-137490 bp Ori: BBS34867.1 Gene: ykgN Feature: domain Description: InsE Location: 137146-137416 bp Feature: domain Description: InsE Location: 1 371 46-1 3741 6 bp Feature: gene Location: 137447-138598 bp Ori: BBS34868.1 Gene: insI4 Feature: domain Description: HTH_38 Location: 137456-137570 bp Feature: domain Description: HTH_38 Location: 1 37456-1 37570 bp Feature: domain Description: Tra8 Location: 137606-138587 bp Feature: domain Description: Tra8 Location: 1 37606-1 38587 bp Feature: gene Location: 139694-141217 bp Ori: BBS34869.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139967-140699 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39967-1 40699 bp Feature: domain Description: GIIM Note: maturase Location: 140774-140972 bp Feature: domain Description: GIIM Note: maturase Location: 1 40774-1 40972 bp Feature: gene Location: 141382-141774 bp Ori: BBS34870.1 Feature: domain Description: PHA02517 Location: 141388-141766 bp Feature: domain Description: PHA0251 7 Location: 1 41 388-1 41 766 bp Feature: gene Location: 141927-142352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_38 (pfam13936), Tra8 (COG2826), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: AP022126.1 Enterobacter cloacae DNA, complete genome, strain: WP5-S18-CRE-02 (5194790 bp)
Overview 1 RT 1: 575990-580310 bp 2 RT 2: 1097786-1103255 bp 3 RT 3: 4336927-4343534 bp 4 RT 4: 4463332-4468780 bp Neighborhood of RT #1 [575990, 580310] AAA_15 InsE RVT-GII GIIM PHA02517 Neighborhood of RT #2 [1097786, 1103278] YeeP InsE RVT-GII GIIM PHA02517 IS5 Neighborhood of RT #3 [4336927, 4343617] Tra8 HTH_38 HTH_38 RVT-GII GIIM fruct_sucro_rep scrB_fam Neighborhood of RT #4 [4463332, 4468780] PRK05658 PRK10201 RVT-UG11 Feature: gene Location: 575990-576166 bp Ori: BBS30341.1 Feature: domain Description: AAA_15 Location: 575993-576143 bp Feature: domain Description: AAA_15 Location: 575993-576143 bp Feature: gene Location: 576227-576505 bp Ori: BBS30342.1 Feature: domain Description: InsE Location: 576239-576497 bp Feature: domain Description: InsE Location: 5762 39-576497 bp Feature: gene Location: 577564-579087 bp Ori: BBS30343.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577837-578569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 577837-578569 bp Feature: domain Description: GIIM Note: maturase Location: 578644-578842 bp Feature: domain Description: GIIM Note: maturase Location: 578644-578842 bp Feature: gene Location: 579252-579644 bp Ori: BBS30344.1 Feature: domain Description: PHA02517 Location: 579258-579636 bp Feature: domain Description: PHA02 517 Location: 5792 58-579636 bp Feature: gene Location: 579669-580310 bp Feature: gene Location: 1097786-1098649 bp Ori: BBS30831.1 Gene: ykfA Feature: domain Description: YeeP Location: 1097789-1098647 bp Feature: domain Description: YeeP Location: 1097789-1098647 bp Feature: gene Location: 1098830-1099108 bp Ori: BBS30832.1 Feature: domain Description: InsE Location: 1098842-1099100 bp Feature: domain Description: InsE Location: 1098842 -1099100 bp Feature: gene Location: 1100167-1101690 bp Ori: BBS30833.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1100440-1101172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1100440-1101172 bp Feature: domain Description: GIIM Note: maturase Location: 1101247-1101445 bp Feature: domain Description: GIIM Note: maturase Location: 11012 47-1101445 bp Feature: gene Location: 1101813-1102247 bp Ori: BBS30834.1 Feature: domain Description: PHA02517 Location: 1101816-1102239 bp Feature: domain Description: PHA02 517 Location: 1101816-1102 2 39 bp Feature: gene Location: 1102298-1103278 bp Ori: BBS30835.1 Feature: domain Description: IS5 Location: 1102484-1103255 bp Feature: domain Description: IS5 Location: 1102 484-11032 55 bp Feature: gene Location: 4336927-4337658 bp Ori: BBS33932.1 Feature: domain Description: Tra8 Location: 4336930-4337647 bp Feature: domain Description: Tra8 Location: 4336930-4337647 bp Feature: gene Location: 4337782-4338078 bp Ori: BBS33933.1 Feature: domain Description: HTH_38 Location: 4337794-4337905 bp Feature: domain Description: HTH_38 Location: 4337794-4337905 bp Feature: domain Description: HTH_38 Location: 4337956-4338076 bp Feature: domain Description: HTH_38 Location: 4337956-4338076 bp Feature: gene Location: 4339226-4340749 bp Ori: BBS33934.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4339499-4340231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4339499-43402 31 bp Feature: domain Description: GIIM Note: maturase Location: 4340306-4340504 bp Feature: domain Description: GIIM Note: maturase Location: 4340306-4340504 bp Feature: gene Location: 4341183-4342187 bp Ori: BBS33935.1 Feature: domain Description: fruct_sucro_rep Location: 4341204-4342182 bp Feature: domain Description: fruct_sucro_rep Location: 43412 04-4342 182 bp Feature: gene Location: 4342217-4343617 bp Ori: BBS33936.1 Feature: domain Description: scrB_fam Location: 4342262-4343534 bp Feature: domain Description: scrB_fam Location: 4342 2 62 -4343534 bp Feature: gene Location: 4463332-4465176 bp Ori: BBS34054.1 Gene: rpoD Feature: domain Description: PRK05658 Location: 4463338-4465174 bp Feature: domain Description: PRK05658 Location: 4463338-4465174 bp Feature: gene Location: 4465703-4466209 bp Ori: BBS34055.1 Feature: domain Description: PRK10201 Location: 4465706-4466204 bp Feature: domain Description: PRK102 01 Location: 4465706-44662 04 bp Feature: gene Location: 4466603-4467364 bp Ori: BBS34056.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4466729-4467182 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 446672 9-4467182 bp Feature: gene Location: 4467342-4467506 bp Feature: gene Location: 4468364-4468780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), InsE (COG2963), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), YeeP (COG3596), IS5 (COG3039), Tra8 (COG2826), HTH_38 (pfam13936), fruct_sucro_rep (TIGR02417)
scrB_fam (TIGR01322), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11