myRT

myRT report for GCA_014169395.1_ASM1416939v1

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Seq: AP022159.1 Escherichia coli DNA, complete genome, strain: WP5-S18-ESBL-07 (5092774 bp)
Overview 1 RT 1: 995814-1000558 bp 2 RT 2: 1022500-1027837 bp 3 RT 3: 1957689-1961824 bp 4 RT 4: 3943151-3949260 bp Neighborhood of RT #1 [995814, 1000558] InsE PHA02517 RVT-GII GIIM Neighborhood of RT #2 [1022500, 1027845] PFLE_PFLC RVT-GII RVT-GII GIIM YesM Neighborhood of RT #3 [1957689, 1961826] PRK09413 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #4 [3943151, 3949319] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Feature: gene Location: 995814-996164 bp Ori: BBS56389.1 Feature: domain Description: InsE Location: 995823-996111 bp Feature: domain Description: InsE Location: 995823-9961 1 1 bp Feature: gene Location: 996269-996640 bp Ori: BBS56390.1 Feature: domain Description: PHA02517 Location: 996272-996638 bp Feature: domain Description: PHA0251 7 Location: 996272-996638 bp Feature: gene Location: 996832-998355 bp Ori: BBS56391.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 997105-997837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9971 05-997837 bp Feature: domain Description: GIIM Note: maturase Location: 997912-998110 bp Feature: domain Description: GIIM Note: maturase Location: 99791 2-9981 1 0 bp Feature: gene Location: 999363-1000187 bp Feature: gene Location: 1000235-1000558 bp Feature: gene Location: 1022500-1023417 bp Ori: BBS56417.1 Feature: domain Description: PFLE_PFLC Location: 1022536-1023391 bp Feature: domain Description: PFLE_PFLC Location: 1 022536-1 023391 bp Feature: gene Location: 1023554-1024459 bp Feature: gene Location: 1024945-1025484 bp Ori: BBS56419.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025275-1025353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 025275-1 025353 bp Feature: gene Location: 1025551-1026033 bp Ori: BBS56420.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025560-1025800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 025560-1 025800 bp Feature: domain Description: GIIM Note: maturase Location: 1025848-1026028 bp Feature: domain Description: GIIM Note: maturase Location: 1 025848-1 026028 bp Feature: gene Location: 1026355-1026543 bp Feature: gene Location: 1026616-1027845 bp Ori: BBS56422.1 Feature: domain Description: YesM Location: 1027096-1027837 bp Feature: domain Description: YesM Location: 1 027096-1 027837 bp Feature: gene Location: 1957689-1958054 bp Ori: BBS57254.1 Gene: insC1 Feature: domain Description: PRK09413 Location: 1957692-1958052 bp Feature: domain Description: PRK0941 3 Location: 1 957692-1 958052 bp Feature: gene Location: 1958343-1958714 bp Ori: BBS57255.1 Feature: domain Description: PHA02517 Location: 1958346-1958712 bp Feature: domain Description: PHA0251 7 Location: 1 958346-1 95871 2 bp Feature: gene Location: 1958906-1960429 bp Ori: BBS57256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1959179-1959911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9591 79-1 95991 1 bp Feature: domain Description: GIIM Note: maturase Location: 1959986-1960184 bp Feature: domain Description: GIIM Note: maturase Location: 1 959986-1 9601 84 bp Feature: gene Location: 1961021-1961500 bp Ori: BBS57257.1 Feature: domain Description: PHA02517 Location: 1961081-1961435 bp Feature: domain Description: PHA0251 7 Location: 1 961 081 -1 961 435 bp Feature: gene Location: 1961500-1961826 bp Ori: BBS57258.1 Feature: domain Description: InsE Location: 1961503-1961824 bp Feature: domain Description: InsE Location: 1 961 503-1 961 824 bp Feature: gene Location: 3943151-3944071 bp Ori: BBS59122.1 Feature: domain Description: AbiEii Location: 3943193-3943934 bp Feature: domain Description: AbiEii Location: 39431 93-3943934 bp Feature: gene Location: 3944058-3944840 bp Ori: BBS59123.1 Feature: domain Description: AbiEi_3_N Location: 3944070-3944331 bp Feature: domain Description: AbiEi_3_N Location: 3944070-3944331 bp Feature: domain Description: AbiEi_3 Location: 3944343-3944799 bp Feature: domain Description: AbiEi_3 Location: 3944343-3944799 bp Feature: gene Location: 3945156-3948365 bp Ori: BBS59124.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3945684-3946173 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3945684-39461 73 bp Feature: domain Description: nitrilase Location: 3947679-3948276 bp Feature: domain Description: nitrilase Location: 3947679-3948276 bp Feature: gene Location: 3948712-3949182 bp Feature: gene Location: 3949179-3949319 bp Ori: BBS59126.1 Feature: domain Description: SfsB Location: 3949188-3949260 bp Feature: domain Description: SfsB Location: 39491 88-3949260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), YesM (COG2972), PRK09413 (IS2 repressor TnpA; Reviewed), AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459)
RVT-UG5, nitrilase (cl11424), SfsB (COG3423)