myRT

myRT report for GCA_014169415.1_ASM1416941v1

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Seq: AP022161.1 Escherichia coli DNA, complete genome, strain: WP5-S18-ESBL-08 (5189151 bp)
Overview 1 RT 1: 96419-100301 bp 2 RT 2: 882396-887781 bp 3 RT 3: 2044828-2050670 bp Neighborhood of RT #1 [96419, 100306] rph pyrE RVT-Retrons slmA dut Neighborhood of RT #2 [882396, 887807] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Neighborhood of RT #3 [2044828, 2050705] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Feature: gene Location: 96419-97135 bp Ori: BBS60333.1 Gene: rph Feature: domain Description: rph Location: 96422-97130 bp Feature: domain Description: rph Location: 96422-971 30 bp Feature: gene Location: 97201-97842 bp Ori: BBS60334.1 Gene: pyrE Feature: domain Description: pyrE Location: 97204-97837 bp Feature: domain Description: pyrE Location: 97204-97837 bp Feature: gene Location: 98140-99099 bp Ori: BBS60335.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98275-98824 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 98275-98824 bp Feature: gene Location: 99145-99741 bp Ori: BBS60336.1 Gene: slmA Feature: domain Description: slmA Location: 99151-99727 bp Feature: domain Description: slmA Location: 991 51 -99727 bp Feature: gene Location: 99848-100306 bp Ori: BBS60337.1 Gene: dut Feature: domain Description: dut Location: 99854-100301 bp Feature: domain Description: dut Location: 99854-1 00301 bp Feature: gene Location: 882396-883625 bp Ori: BBS61090.1 Feature: domain Description: YesM Location: 882876-883617 bp Feature: domain Description: YesM Location: 882876-88361 7 bp Feature: gene Location: 883698-883886 bp Feature: gene Location: 884274-884756 bp Ori: BBS61092.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884283-884523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884283-884523 bp Feature: domain Description: GIIM Note: maturase Location: 884571-884751 bp Feature: domain Description: GIIM Note: maturase Location: 884571 -884751 bp Feature: gene Location: 884823-885362 bp Ori: BBS61093.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885153-885231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8851 53-885231 bp Feature: gene Location: 885848-886753 bp Feature: gene Location: 886890-887807 bp Ori: BBS61095.1 Feature: domain Description: PFLE_PFLC Location: 886926-887781 bp Feature: domain Description: PFLE_PFLC Location: 886926-887781 bp Feature: gene Location: 2044828-2045106 bp Ori: BBS62155.1 Feature: domain Description: DUF5339 Location: 2044891-2045092 bp Feature: domain Description: DUF5339 Location: 2044891 -2045092 bp Feature: gene Location: 2045444-2046475 bp Ori: BBS62156.1 Gene: ansA Feature: domain Description: Asparaginase_2 Location: 2045534-2046467 bp Feature: domain Description: Asparaginase_2 Location: 2045534-2046467 bp Feature: gene Location: 2046999-2047445 bp Ori: BBS62157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2047305-2047407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2047305-2047407 bp Feature: gene Location: 2048091-2049452 bp Ori: BBS62158.1 Feature: domain Description: DcuC Location: 2048094-2049426 bp Feature: domain Description: DcuC Location: 2048094-2049426 bp Feature: gene Location: 2049449-2050705 bp Ori: BBS62159.1 Feature: domain Description: PRK13381 Location: 2049455-2050670 bp Feature: domain Description: PRK1 3381 Location: 2049455-2050670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576), YesM (COG2972), RVT-GII, GIIM (pfam08388), PFLE_PFLC (TIGR02494), DUF5339 (pfam17274)
Asparaginase_2 (pfam01112), DcuC (TIGR00771), PRK13381 (peptidase T; Provisional)