myRT

myRT report for GCA_014169575.1_ASM1416957v1

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Seq: AP022208.1 Escherichia coli plasmid pWP7-S18-ESBL-09_1 DNA, complete genome, strain: WP7-S18-ESBL-09 (214586 bp)
Overview 1 RT 1: 1800-4475 bp 2 RT 2: 202204-206028 bp Neighborhood of RT #1 [1800, 4483] InsE PHA02517 RVT-GII PRK10173 PRK10173 Neighborhood of RT #2 [202204, 206030] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1800-2126 bp Ori: BBT13689.1 Feature: domain Description: InsE Location: 1803-2124 bp Feature: domain Description: InsE Location: 1 803-21 24 bp Feature: gene Location: 2126-2605 bp Ori: BBT13690.1 Feature: domain Description: PHA02517 Location: 2186-2540 bp Feature: domain Description: PHA0251 7 Location: 21 86-2540 bp Feature: gene Location: 3197-3700 bp Ori: BBT13691.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3470-3539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3470-3539 bp Feature: gene Location: 3739-4059 bp Ori: BBT13692.1 Feature: domain Description: PRK10173 Location: 3742-3970 bp Feature: domain Description: PRK1 01 73 Location: 3742-3970 bp Feature: gene Location: 4034-4483 bp Ori: BBT13693.1 Feature: domain Description: PRK10173 Location: 4037-4475 bp Feature: domain Description: PRK1 01 73 Location: 4037-4475 bp Feature: gene Location: 202204-202608 bp Ori: BBT13927.1 Feature: domain Description: InsE Location: 202234-202570 bp Feature: domain Description: InsE Location: 202234-202570 bp Feature: gene Location: 202637-202993 bp Ori: BBT13928.1 Feature: domain Description: PHA02517 Location: 202640-202949 bp Feature: domain Description: PHA0251 7 Location: 202640-202949 bp Feature: gene Location: 203110-204633 bp Ori: BBT13929.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203383-204115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 203383-2041 1 5 bp Feature: domain Description: GIIM Note: maturase Location: 204190-204388 bp Feature: domain Description: GIIM Note: maturase Location: 2041 90-204388 bp Feature: gene Location: 205225-205704 bp Ori: BBT13930.1 Feature: domain Description: PHA02517 Location: 205285-205639 bp Feature: domain Description: PHA0251 7 Location: 205285-205639 bp Feature: gene Location: 205704-206030 bp Ori: BBT13931.1 Feature: domain Description: InsE Location: 205707-206028 bp Feature: domain Description: InsE Location: 205707-206028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), GIIM (pfam08388)

Seq: AP022207.1 Escherichia coli DNA, complete genome, strain: WP7-S18-ESBL-09 (5205472 bp)
Overview 1 RT 1: 835016-838842 bp 2 RT 2: 3377714-3382162 bp 3 RT 3: 4095830-4101939 bp 4 RT 4: 4150603-4155608 bp Neighborhood of RT #1 [835016, 838842] InsE PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [3377714, 3382162] Q FRG RVT-Retrons HTH_XRE Neighborhood of RT #3 [4095830, 4101998] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase SfsB Neighborhood of RT #4 [4150603, 4155610] InsE PHA02517 RVT-GII GIIM PHA02517 IcmF Feature: gene Location: 835016-835342 bp Ori: BBT09628.1 Feature: domain Description: InsE Location: 835019-835340 bp Feature: domain Description: InsE Location: 835019-835340 bp Feature: gene Location: 835342-835821 bp Ori: BBT09629.1 Feature: domain Description: PHA02517 Location: 835402-835756 bp Feature: domain Description: PHA02 517 Location: 835402 -835756 bp Feature: gene Location: 836413-837936 bp Ori: BBT09630.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836686-837418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836686-837418 bp Feature: domain Description: GIIM Note: maturase Location: 837493-837691 bp Feature: domain Description: GIIM Note: maturase Location: 837493-837691 bp Feature: gene Location: 838053-838499 bp Ori: BBT09631.1 Feature: domain Description: PHA02517 Location: 838056-838497 bp Feature: domain Description: PHA02 517 Location: 838056-838497 bp Feature: gene Location: 838381-838842 bp Feature: gene Location: 3377714-3378748 bp Ori: BBT12063.1 Feature: domain Description: Q Location: 3377717-3378740 bp Feature: domain Description: Q Location: 3377717-3378740 bp Feature: gene Location: 3379261-3380625 bp Ori: BBT12064.1 Feature: domain Description: FRG Location: 3379828-3380113 bp Feature: domain Description: FRG Location: 337982 8-3380113 bp Feature: gene Location: 3380734-3381711 bp Ori: BBT12065.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3380941-3381484 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3380941-3381484 bp Feature: gene Location: 3381650-3381970 bp Ori: BBT12066.1 Feature: domain Description: HTH_XRE Location: 3381665-3381824 bp Feature: domain Description: HTH_XRE Location: 3381665-338182 4 bp Feature: gene Location: 3382007-3382162 bp Feature: gene Location: 4095830-4096750 bp Ori: BBT12694.1 Feature: domain Description: AbiEii Location: 4095872-4096613 bp Feature: domain Description: AbiEii Location: 4095872 -4096613 bp Feature: gene Location: 4096737-4097519 bp Ori: BBT12695.1 Feature: domain Description: AbiEi_3_N Location: 4096749-4097010 bp Feature: domain Description: AbiEi_3_N Location: 4096749-4097010 bp Feature: domain Description: AbiEi_3 Location: 4097022-4097478 bp Feature: domain Description: AbiEi_3 Location: 409702 2 -4097478 bp Feature: gene Location: 4097835-4101044 bp Ori: BBT12696.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4098363-4098852 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4098363-4098852 bp Feature: domain Description: nitrilase Location: 4100358-4100955 bp Feature: domain Description: nitrilase Location: 4100358-4100955 bp Feature: gene Location: 4101391-4101861 bp Feature: gene Location: 4101858-4101998 bp Ori: BBT12698.1 Feature: domain Description: SfsB Location: 4101867-4101939 bp Feature: domain Description: SfsB Location: 4101867-4101939 bp Feature: gene Location: 4150603-4150929 bp Ori: BBT12741.1 Feature: domain Description: InsE Location: 4150606-4150927 bp Feature: domain Description: InsE Location: 4150606-415092 7 bp Feature: gene Location: 4150929-4151408 bp Ori: BBT12742.1 Feature: domain Description: PHA02517 Location: 4150989-4151343 bp Feature: domain Description: PHA02 517 Location: 4150989-4151343 bp Feature: gene Location: 4152000-4153523 bp Ori: BBT12743.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4152273-4153005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4152 2 73-4153005 bp Feature: domain Description: GIIM Note: maturase Location: 4153080-4153278 bp Feature: domain Description: GIIM Note: maturase Location: 4153080-41532 78 bp Feature: gene Location: 4153715-4154086 bp Ori: BBT12744.1 Feature: domain Description: PHA02517 Location: 4153718-4154084 bp Feature: domain Description: PHA02 517 Location: 4153718-4154084 bp Feature: gene Location: 4154183-4155610 bp Ori: BBT12745.1 Feature: domain Description: IcmF Location: 4154186-4155608 bp Feature: domain Description: IcmF Location: 4154186-4155608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Q (PHA02536), FRG (smart00901), RVT-Retrons, HTH_XRE (smart00530), AbiEii (pfam08843), AbiEi_3_N (pfam17194)
AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), SfsB (COG3423), IcmF (COG3523)