myRT

myRT report for GCA_014169855.1_ASM1416985v1

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Seq: AP022288.1 Escherichia coli plasmid pWP9-S17-ESBL-11_1 DNA, complete genome, strain: WP9-S17-ESBL-11 (127169 bp)
Overview 1 RT 1: 97505-103394 bp Neighborhood of RT #1 [97505, 103396] BaeS Rve RVT-GII GIIM PHA02517 InsE Feature: gene Location: 97505-98977 bp Ori: BBU02542.1 Feature: domain Description: BaeS Location: 97946-98975 bp Feature: domain Description: BaeS Location: 97946-98975 bp Feature: gene Location: 99576-100280 bp Ori: BBU02543.1 Feature: domain Description: Rve Location: 99579-100224 bp Feature: domain Description: Rve Location: 99579-1 00224 bp Feature: gene Location: 100477-102000 bp Ori: BBU02544.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100750-101482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00750-1 01 482 bp Feature: domain Description: GIIM Note: maturase Location: 101557-101755 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 557-1 01 755 bp Feature: gene Location: 102621-103070 bp Ori: BBU02545.1 Feature: domain Description: PHA02517 Location: 102681-103035 bp Feature: domain Description: PHA0251 7 Location: 1 02681 -1 03035 bp Feature: gene Location: 103070-103396 bp Ori: BBU02546.1 Feature: domain Description: InsE Location: 103073-103394 bp Feature: domain Description: InsE Location: 1 03073-1 03394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), Rve (COG3316), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: AP022287.1 Escherichia coli DNA, complete genome, strain: WP9-S17-ESBL-11 (5232187 bp)
Overview 1 RT 1: 86500-91936 bp 2 RT 2: 105227-109363 bp 3 RT 3: 756158-762000 bp 4 RT 4: 959594-964979 bp 5 RT 5: 986947-991638 bp 6 RT 6: 2087858-2091993 bp 7 RT 7: 4389959-4395223 bp Neighborhood of RT #1 [86500, 91936] zinc_ribbon_11 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [105227, 109419] COG4584 COG4584 IstB_IS21_ATP IstB_IS21 RVT-GII GIIM HTH_ARSR Neighborhood of RT #3 [756158, 762035] DUF5339 Asparaginase_2 RVT-GII DcuC PRK13381 Neighborhood of RT #4 [959594, 965005] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Neighborhood of RT #5 [986947, 991691] RVT-GII GIIM PHA02517 InsE Neighborhood of RT #6 [2087858, 2091995] PRK09413 PHA02517 RVT-GII GIIM PHA02517 InsE Neighborhood of RT #7 [4389959, 4395426] prfC PRK10597 RVT-Retrons TIR_2 Caudo_TAP Methyltransf_12 Feature: gene Location: 86500-86910 bp Ori: BBT97676.1 Feature: domain Description: zinc_ribbon_11 Location: 86542-86860 bp Feature: domain Description: zinc_ribbon_11 Location: 86542 -86860 bp Feature: gene Location: 87162-87602 bp Ori: BBT97677.1 Feature: domain Description: PHA02517 Location: 87165-87567 bp Feature: domain Description: PHA02 517 Location: 87165-87567 bp Feature: gene Location: 87731-89254 bp Ori: BBT97678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88004-88736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88004-88736 bp Feature: domain Description: GIIM Note: maturase Location: 88811-89009 bp Feature: domain Description: GIIM Note: maturase Location: 88811-89009 bp Feature: gene Location: 90298-90609 bp Ori: BBT97679.1 Feature: domain Description: InsE Location: 90301-90592 bp Feature: domain Description: InsE Location: 90301-90592 bp Feature: gene Location: 91403-91936 bp Feature: gene Location: 105227-106288 bp Ori: BBT97696.1 Feature: domain Description: COG4584 Location: 105236-105626 bp Feature: domain Description: COG4584 Location: 1052 36-10562 6 bp Feature: domain Description: COG4584 Location: 105740-106154 bp Feature: domain Description: COG4584 Location: 105740-106154 bp Feature: gene Location: 106305-107060 bp Ori: BBT97697.1 Feature: domain Description: IstB_IS21_ATP Location: 106377-106461 bp Feature: domain Description: IstB_IS2 1_ATP Location: 106377-106461 bp Feature: domain Description: IstB_IS21 Location: 106470-106995 bp Feature: domain Description: IstB_IS2 1 Location: 106470-106995 bp Feature: gene Location: 107301-108251 bp Ori: BBT97698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107310-107874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107310-107874 bp Feature: domain Description: GIIM Note: maturase Location: 107952-108177 bp Feature: domain Description: GIIM Note: maturase Location: 107952 -108177 bp Feature: gene Location: 108593-108730 bp Feature: gene Location: 109069-109419 bp Ori: BBT97700.1 Feature: domain Description: HTH_ARSR Location: 109144-109363 bp Feature: domain Description: HTH_ARSR Location: 109144-109363 bp Feature: gene Location: 756158-756436 bp Ori: BBT98304.1 Feature: domain Description: DUF5339 Location: 756221-756422 bp Feature: domain Description: DUF5339 Location: 7562 2 1-75642 2 bp Feature: gene Location: 756774-757805 bp Ori: BBT98305.1 Gene: ansA Feature: domain Description: Asparaginase_2 Location: 756864-757797 bp Feature: domain Description: Asparaginase_2 Location: 756864-757797 bp Feature: gene Location: 758329-758775 bp Ori: BBT98306.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758635-758737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 758635-758737 bp Feature: gene Location: 759421-760782 bp Ori: BBT98307.1 Feature: domain Description: DcuC Location: 759424-760756 bp Feature: domain Description: DcuC Location: 75942 4-760756 bp Feature: gene Location: 760779-762035 bp Ori: BBT98308.1 Feature: domain Description: PRK13381 Location: 760785-762000 bp Feature: domain Description: PRK13381 Location: 760785-762 000 bp Feature: gene Location: 959594-960823 bp Ori: BBT98497.1 Feature: domain Description: YesM Location: 960074-960815 bp Feature: domain Description: YesM Location: 960074-960815 bp Feature: gene Location: 960896-961084 bp Feature: gene Location: 961472-961954 bp Ori: BBT98499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961481-961721 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 961481-96172 1 bp Feature: domain Description: GIIM Note: maturase Location: 961769-961949 bp Feature: domain Description: GIIM Note: maturase Location: 961769-961949 bp Feature: gene Location: 962021-962560 bp Ori: BBT98500.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962351-962429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962 351-962 42 9 bp Feature: gene Location: 963046-963951 bp Feature: gene Location: 964088-965005 bp Ori: BBT98502.1 Feature: domain Description: PFLE_PFLC Location: 964124-964979 bp Feature: domain Description: PFLE_PFLC Location: 96412 4-964979 bp Feature: gene Location: 986947-987270 bp Feature: gene Location: 987318-988142 bp Feature: gene Location: 989150-990673 bp Ori: BBT98528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989423-990155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98942 3-990155 bp Feature: domain Description: GIIM Note: maturase Location: 990230-990428 bp Feature: domain Description: GIIM Note: maturase Location: 9902 30-99042 8 bp Feature: gene Location: 990865-991236 bp Ori: BBT98529.1 Feature: domain Description: PHA02517 Location: 990868-991234 bp Feature: domain Description: PHA02 517 Location: 990868-9912 34 bp Feature: gene Location: 991341-991691 bp Ori: BBT98530.1 Feature: domain Description: InsE Location: 991350-991638 bp Feature: domain Description: InsE Location: 991350-991638 bp Feature: gene Location: 2087858-2088223 bp Ori: BBT99523.1 Gene: insC1 Feature: domain Description: PRK09413 Location: 2087861-2088221 bp Feature: domain Description: PRK09413 Location: 2 087861-2 0882 2 1 bp Feature: gene Location: 2088512-2088883 bp Ori: BBT99524.1 Feature: domain Description: PHA02517 Location: 2088515-2088881 bp Feature: domain Description: PHA02 517 Location: 2 088515-2 088881 bp Feature: gene Location: 2089075-2090598 bp Ori: BBT99525.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2089348-2090080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 089348-2 090080 bp Feature: domain Description: GIIM Note: maturase Location: 2090155-2090353 bp Feature: domain Description: GIIM Note: maturase Location: 2 090155-2 090353 bp Feature: gene Location: 2091190-2091669 bp Ori: BBT99526.1 Feature: domain Description: PHA02517 Location: 2091250-2091604 bp Feature: domain Description: PHA02 517 Location: 2 0912 50-2 091604 bp Feature: gene Location: 2091669-2091995 bp Ori: BBT99527.1 Feature: domain Description: InsE Location: 2091672-2091993 bp Feature: domain Description: InsE Location: 2 091672 -2 091993 bp Feature: gene Location: 4389959-4391545 bp Ori: BBU01671.1 Gene: prfC Feature: domain Description: prfC Location: 4389977-4391543 bp Feature: domain Description: prfC Location: 4389977-4391543 bp Feature: gene Location: 4391765-4392025 bp Ori: BBU01672.1 Feature: domain Description: PRK10597 Location: 4391768-4392008 bp Feature: domain Description: PRK10597 Location: 4391768-4392 008 bp Feature: gene Location: 4392359-4393987 bp Ori: BBU01673.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4392674-4393265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4392 674-43932 65 bp Feature: domain Description: TIR_2 Location: 4393592-4393925 bp Feature: domain Description: TIR_2 Location: 4393592 -439392 5 bp Feature: gene Location: 4394432-4394701 bp Ori: BBU01674.1 Feature: domain Description: Caudo_TAP Location: 4394525-4394690 bp Feature: domain Description: Caudo_TAP Location: 439452 5-4394690 bp Feature: gene Location: 4394770-4395426 bp Ori: BBU01675.1 Feature: domain Description: Methyltransf_12 Location: 4394932-4395223 bp Feature: domain Description: Methyltransf_12 Location: 4394932 -43952 2 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT zinc_ribbon_11 (pfam11682), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), HTH_ARSR (smart00418), DUF5339 (pfam17274)
Asparaginase_2 (pfam01112), DcuC (TIGR00771), PRK13381 (peptidase T; Provisional), YesM (COG2972), PFLE_PFLC (TIGR02494), PRK09413 (IS2 repressor TnpA; Reviewed), prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676)
Caudo_TAP (pfam02413), Methyltransf_12 (pfam08242)