myRT

myRT report for GCA_014170015.1_ASM1417001v1

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Seq: CP054285.1 Klebsiella pneumoniae strain IDR1800050501-01-02 chromosome, complete genome (5266171 bp)
Overview 1 RT 1: 2410020-2413986 bp 2 RT 2: 3631383-3636682 bp Neighborhood of RT #1 [2410020, 2414870] Nuc_deoxyrib_tr RVT-Retrons AAA_21 Neighborhood of RT #2 [3631383, 3636687] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 2410020-2410889 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2410542-2410713 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 241 0542-241 071 3 bp Feature: gene Location: 2410909-2411064 bp Feature: gene Location: 2411545-2412646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2411725-2412259 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 241 1 725-241 2259 bp Feature: gene Location: 2412761-2413024 bp Feature: gene Location: 2413110-2414870 bp Ori: QNB27038.1 Feature: domain Description: AAA_21 Location: 2413599-2413986 bp Feature: domain Description: AAA_21 Location: 241 3599-241 3986 bp Feature: gene Location: 3631383-3632348 bp Ori: QNB30228.1 Gene: sapB Feature: domain Description: PRK15110 Location: 3631386-3632346 bp Feature: domain Description: PRK1 51 1 0 Location: 3631 386-3632346 bp Feature: gene Location: 3632553-3633219 bp Feature: domain Description: PRK09951 Location: 3632556-3632706 bp Feature: domain Description: PRK09951 Location: 3632556-3632706 bp Feature: gene Location: 3633420-3634328 bp Ori: QNB30229.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3633693-3634149 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 3633693-36341 49 bp Feature: gene Location: 3635001-3636266 bp Ori: QNB30230.1 Feature: domain Description: umuC Location: 3635004-3636264 bp Feature: domain Description: umuC Location: 3635004-3636264 bp Feature: gene Location: 3636268-3636687 bp Ori: QNB30231.1 Gene: umuD Feature: domain Description: PRK10276 Location: 3636271-3636682 bp Feature: domain Description: PRK1 0276 Location: 3636271 -3636682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304), PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)