myRT

myRT report for GCA_014171495.1_ASM1417149v1

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Seq: CP049134.1 Paraburkholderia tropica strain IAC135 chromosome A, complete sequence (3280377 bp)
Overview 1 RT 1: 225619-232611 bp Neighborhood of RT #1 [225619, 232628] AtoC TlpA_like_family RVT_N RVT-GII YkfC HNHc YifB Feature: gene Location: 225619-226980 bp Ori: QNB10285.1 Feature: domain Description: AtoC Location: 225640-226951 bp Feature: domain Description: AtoC Location: 225640-226951 bp Feature: gene Location: 227042-227572 bp Ori: QNB10286.1 Feature: domain Description: TlpA_like_family Location: 227180-227519 bp Feature: domain Description: TlpA_like_family Location: 2271 80-22751 9 bp Feature: gene Location: 227777-229480 bp Ori: QNB10287.1 Gene: ltrA Feature: domain Description: RVT_N Location: 227834-228077 bp Feature: domain Description: RVT_N Location: 227834-228077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 228122-228770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281 22-228770 bp Feature: domain Description: YkfC Location: 228965-229073 bp Feature: domain Description: YkfC Location: 228965-229073 bp Feature: domain Description: HNHc Note: nucleases Location: 229274-229439 bp Feature: domain Description: HNHc Note: nucleases Location: 229274-229439 bp Feature: gene Location: 230826-231341 bp Feature: gene Location: 231756-232628 bp Feature: domain Description: YifB Location: 231762-232611 bp Feature: domain Description: YifB Location: 231 762-23261 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AtoC (COG2204), TlpA_like_family (cd02966), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), YifB (COG0606)