myRT

myRT report for GCA_014217135.1_ASM1421713v1

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Seq: CP051610.1 Escherichia coli O25b:H4-ST131 strain 2019_APHA plasmid pAPHA_2019 (113351 bp)
Overview 1 RT 1: 61625-65782 bp 2 RT 2: 75426-78854 bp Neighborhood of RT #1 [61625, 65782] InsE PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [75426, 79078] InsE RVT-GII PRK10173 Sigma70_r4_2 Sigma70_r4_2 Feature: gene Location: 61625-62029 bp Ori: QNE95309.1 Feature: domain Description: InsE Location: 61655-61991 bp Feature: domain Description: InsE Location: 61 655-61 991 bp Feature: gene Location: 62058-62441 bp Feature: domain Description: PHA02517 Location: 62064-62397 bp Feature: domain Description: PHA0251 7 Location: 62064-62397 bp Feature: gene Location: 62531-64039 bp Ori: QNE95353.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62789-63521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62789-63521 bp Feature: domain Description: GIIM Note: maturase Location: 63596-63794 bp Feature: domain Description: GIIM Note: maturase Location: 63596-63794 bp Feature: gene Location: 64712-65451 bp Feature: domain Description: InsE Location: 64715-65051 bp Feature: domain Description: InsE Location: 6471 5-65051 bp Feature: gene Location: 65477-65782 bp Feature: gene Location: 75426-75686 bp Feature: gene Location: 75788-76527 bp Feature: domain Description: InsE Location: 75791-76127 bp Feature: domain Description: InsE Location: 75791 -761 27 bp Feature: gene Location: 77200-77688 bp Ori: QNE95354.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77458-77530 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77458-77530 bp Feature: gene Location: 77838-78471 bp Feature: domain Description: PRK10173 Location: 77841-78279 bp Feature: domain Description: PRK1 01 73 Location: 77841 -78279 bp Feature: gene Location: 78593-79078 bp Ori: QNE95318.1 Feature: domain Description: Sigma70_r4_2 Location: 78653-78725 bp Feature: domain Description: Sigma70_r4_2 Location: 78653-78725 bp Feature: domain Description: Sigma70_r4_2 Location: 78794-78854 bp Feature: domain Description: Sigma70_r4_2 Location: 78794-78854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), Sigma70_r4_2 (pfam08281)