myRT

myRT report for GCA_014217645.1_ASM1421764v1

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Seq: CP043645.1 Hymenobacter sp. NBH84 plasmid unnamed1, complete sequence (190353 bp)
Overview 1 RT 1: 169058-174666 bp Neighborhood of RT #1 [169058, 174908] PRK10276 umuC RVT_N RVT-GII GIIM HNHc umuC DUF4238 Feature: gene Location: 169058-169525 bp Ori: QNE42028.1 Gene: umuD Feature: domain Description: PRK10276 Location: 169079-169481 bp Feature: domain Description: PRK1 0276 Location: 1 69079-1 69481 bp Feature: gene Location: 169590-169694 bp Feature: domain Description: umuC Location: 169593-169695 bp Feature: domain Description: umuC Location: 1 69593-1 69695 bp Feature: gene Location: 170281-171984 bp Ori: QNE42047.1 Gene: ltrA Feature: domain Description: RVT_N Location: 170293-170539 bp Feature: domain Description: RVT_N Location: 1 70293-1 70539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 170581-171250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 70581 -1 71 250 bp Feature: domain Description: GIIM Note: maturase Location: 171355-171586 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 355-1 71 586 bp Feature: domain Description: HNHc Note: nucleases Location: 171772-171928 bp Feature: domain Description: HNHc Note: nucleases Location: 1 71 772-1 71 928 bp Feature: gene Location: 172041-173261 bp Feature: domain Description: umuC Location: 172044-173256 bp Feature: domain Description: umuC Location: 1 72044-1 73256 bp Feature: gene Location: 173913-174908 bp Ori: QNE42029.1 Feature: domain Description: DUF4238 Location: 173937-174666 bp Feature: domain Description: DUF4238 Location: 1 73937-1 74666 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4238 (pfam14022)

Seq: CP043644.1 Hymenobacter sp. NBH84 chromosome, complete genome (4779090 bp)
Overview 1 RT 1: 3691871-3700248 bp Neighborhood of RT #1 [3691871, 3700295] Mfd mfd RVT-AbiA TonB_C Glycosylasparaginase Feature: gene Location: 3691871-3692098 bp Feature: gene Location: 3692283-3695777 bp Ori: QNE40853.1 Gene: mfd Feature: domain Description: Mfd Location: 3692421-3693174 bp Feature: domain Description: Mfd Location: 3692 42 1-3693174 bp Feature: domain Description: mfd Location: 3693300-3695547 bp Feature: domain Description: mfd Location: 3693300-3695547 bp Feature: gene Location: 3695891-3697876 bp Ori: QNE40854.1 Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 3696362-3696944 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 3696362 -3696944 bp Feature: gene Location: 3698204-3698950 bp Ori: QNE40855.1 Feature: domain Description: TonB_C Location: 3698714-3698939 bp Feature: domain Description: TonB_C Location: 3698714-3698939 bp Feature: gene Location: 3699267-3700295 bp Ori: QNE40856.1 Feature: domain Description: Glycosylasparaginase Location: 3699387-3700248 bp Feature: domain Description: Glycosylasparaginase Location: 3699387-37002 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfd (COG1197), mfd (TIGR00580), RVT-AbiA, TonB_C (pfam03544), Glycosylasparaginase (cd04513)