myRT

myRT report for GCA_014217805.1_ASM1421780v1

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Seq: CP055156.1 Adhaeribacter swui strain KCTC 52873 chromosome, complete genome (5968113 bp)
Overview 1 RT 1: 1872460-1879570 bp 2 RT 2: 4572961-4579552 bp Neighborhood of RT #1 [1872460, 1879570] PTZ00211 PLN02437 group_II_RT_mat RVT-UG19 RAYT Neighborhood of RT #2 [4572961, 4579554] TonB_C RVT-GII GIIM ADOP Feature: gene Location: 1872460-1873419 bp Ori: QNF32756.1 Feature: domain Description: PTZ00211 Location: 1872466-1873417 bp Feature: domain Description: PTZ0021 1 Location: 1 872466-1 87341 7 bp Feature: gene Location: 1873616-1875994 bp Ori: QNF32757.1 Feature: domain Description: PLN02437 Location: 1873619-1875992 bp Feature: domain Description: PLN02437 Location: 1 87361 9-1 875992 bp Feature: gene Location: 1876110-1878275 bp Ori: QNF32758.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 1876221-1876407 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 876221 -1 876407 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 1876476-1876983 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 1 876476-1 876983 bp Feature: gene Location: 1878486-1879016 bp Ori: QNF32759.1 Feature: domain Description: RAYT Location: 1878504-1878960 bp Feature: domain Description: RAYT Location: 1 878504-1 878960 bp Feature: gene Location: 1879277-1879570 bp Feature: gene Location: 4572961-4573422 bp Feature: gene Location: 4573501-4573917 bp Ori: QNF34731.1 Feature: domain Description: TonB_C Location: 4573681-4573912 bp Feature: domain Description: TonB_C Location: 4573681 -457391 2 bp Feature: gene Location: 4574718-4576034 bp Ori: QNF34732.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4574913-4575528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 457491 3-4575528 bp Feature: domain Description: GIIM Note: maturase Location: 4575603-4575813 bp Feature: domain Description: GIIM Note: maturase Location: 4575603-457581 3 bp Feature: gene Location: 4576104-4576553 bp Feature: gene Location: 4577143-4579554 bp Ori: QNF35883.1 Feature: domain Description: ADOP Location: 4577167-4579552 bp Feature: domain Description: ADOP Location: 45771 67-4579552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PTZ00211 (ribonucleoside-diphosphate reductase small subunit; Provisional), PLN02437 (ribonucleoside--diphosphate reductase large subunit), group_II_RT_mat (TIGR04416), RVT-UG19, RAYT (COG1943), TonB_C (pfam03544), RVT-GII, GIIM (pfam08388), ADOP (TIGR03434)

Seq: CP055154.1 Adhaeribacter swui strain KCTC 52873 plasmid unnamed1, complete sequence (141098 bp)
Overview 1 RT 1: 38267-43827 bp Neighborhood of RT #1 [38267, 43874] DUF4096 DDE_Tnp_1_2 RVT-GII GIIM DKNYY DKNYY DKNYY Feature: gene Location: 38267-39094 bp Ori: QNF31210.1 Feature: domain Description: DUF4096 Location: 38306-38516 bp Feature: domain Description: DUF4096 Location: 38306-38516 bp Feature: domain Description: DDE_Tnp_1_2 Location: 38804-39065 bp Feature: domain Description: DDE_Tnp_1_2 Location: 38804-39065 bp Feature: gene Location: 39175-39732 bp Feature: gene Location: 40591-41907 bp Ori: QNF31212.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40786-41401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40786-41401 bp Feature: domain Description: GIIM Note: maturase Location: 41476-41686 bp Feature: domain Description: GIIM Note: maturase Location: 41476-41686 bp Feature: gene Location: 42492-43016 bp Feature: gene Location: 43092-43874 bp Ori: QNF31214.1 Feature: domain Description: DKNYY Location: 43230-43449 bp Feature: domain Description: DKNYY Location: 432 30-43449 bp Feature: domain Description: DKNYY Location: 43476-43587 bp Feature: domain Description: DKNYY Location: 43476-43587 bp Feature: domain Description: DKNYY Location: 43629-43827 bp Feature: domain Description: DKNYY Location: 4362 9-4382 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), DDE_Tnp_1_2 (pfam13586), RVT-GII, GIIM (pfam08388), DKNYY (pfam13644)