myRT

myRT report for GCA_014218175.1_ASM1421817v1

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Seq: CP042294.1 Enterococcus hirae strain HDC14-2 plasmid pHDC14-2.27K, complete genome (27303 bp)
Overview 1 RT 1: 3130-10307 bp Neighborhood of RT #1 [3130, 10307] SR_ResInv HTH_MlrA-CarA PRK07726 RVT-GII HNHc PRK07726 Toprim_Crpt Feature: gene Location: 3130-3747 bp Ori: QNG07003.1 Feature: domain Description: SR_ResInv Location: 3139-3526 bp Feature: domain Description: SR_ResInv Location: 31 39-3526 bp Feature: domain Description: HTH_MlrA-CarA Location: 3640-3739 bp Feature: domain Description: HTH_MlrA-CarA Location: 3640-3739 bp Feature: gene Location: 3747-4109 bp Ori: QNG07004.1 Feature: domain Description: PRK07726 Location: 3756-4089 bp Feature: domain Description: PRK07726 Location: 3756-4089 bp Feature: gene Location: 4846-6732 bp Ori: QNG07005.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5161-5899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 61 -5899 bp Feature: domain Description: HNHc Note: nucleases Location: 6448-6616 bp Feature: domain Description: HNHc Note: nucleases Location: 6448-661 6 bp Feature: gene Location: 6877-8688 bp Ori: QNG07006.1 Feature: domain Description: PRK07726 Location: 6907-8488 bp Feature: domain Description: PRK07726 Location: 6907-8488 bp Feature: domain Description: Toprim_Crpt Location: 8512-8686 bp Feature: domain Description: Toprim_Crpt Location: 851 2-8686 bp Feature: gene Location: 10098-10307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_ResInv (cd03768), HTH_MlrA-CarA (cd01104), PRK07726 (DNA topoisomerase 3), RVT-GII, HNHc (smart00507), Toprim_Crpt (pfam13342)

Seq: CP042293.1 Enterococcus hirae strain HDC14-2 plasmid pHDC14-2.35K, complete genome (35046 bp)
Overview 1 RT 1: 23766-28173 bp Neighborhood of RT #1 [23766, 28173] HTH_Tnp_1 RVT-GII PolY_Pol_V_umuC Feature: gene Location: 23766-23994 bp Ori: QNG06986.1 Feature: domain Description: HTH_Tnp_1 Location: 23772-23976 bp Feature: domain Description: HTH_Tnp_1 Location: 2 3772 -2 3976 bp Feature: gene Location: 23994-24892 bp Feature: gene Location: 24936-26453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24939-25638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4939-2 5638 bp Feature: gene Location: 26535-27830 bp Ori: QNG06987.1 Feature: domain Description: PolY_Pol_V_umuC Location: 26574-27609 bp Feature: domain Description: PolY_Pol_V_umuC Location: 2 6574-2 7609 bp Feature: gene Location: 27823-28173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), RVT-GII, PolY_Pol_V_umuC (cd01700)