myRT

myRT report for GCA_014218315.1_ASM1421831v1

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Seq: AP023327.1 Acetobacter aceti JCM20276 plasmid pAAJCM20276_1 DNA, complete sequence (84396 bp)
Overview 1 RT 1: 59490-63879 bp Neighborhood of RT #1 [59490, 63965] Couple_hipA HipA_C PHA02517 RVT-GII GIIM RVT-GII DDE_3 Feature: gene Location: 59490-60728 bp Ori: BCI68993.1 Feature: domain Description: Couple_hipA Location: 59547-59847 bp Feature: domain Description: Couple_hipA Location: 59547-59847 bp Feature: domain Description: HipA_C Location: 59979-60621 bp Feature: domain Description: HipA_C Location: 59979-60621 bp Feature: gene Location: 60835-61296 bp Ori: BCI68994.1 Feature: domain Description: PHA02517 Location: 60841-61258 bp Feature: domain Description: PHA0251 7 Location: 60841 -61 258 bp Feature: gene Location: 61376-62341 bp Ori: BCI68995.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61400-61817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 400-61 81 7 bp Feature: domain Description: GIIM Note: maturase Location: 61892-62120 bp Feature: domain Description: GIIM Note: maturase Location: 61 892-621 20 bp Feature: gene Location: 62341-62910 bp Ori: BCI68996.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62623-62815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 62623-6281 5 bp Feature: gene Location: 62994-63188 bp Feature: gene Location: 63636-63965 bp Ori: BCI68998.1 Feature: domain Description: DDE_3 Location: 63648-63879 bp Feature: domain Description: DDE_3 Location: 63648-63879 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Couple_hipA (pfam13657), HipA_C (pfam07804), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: AP023328.1 Acetobacter aceti JCM20276 plasmid pAAJCM20276_2 DNA, complete sequence (92082 bp)
Overview 1 RT 1: 35582-38814 bp Neighborhood of RT #1 [35582, 38939] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 35582-35977 bp Feature: gene Location: 36082-36534 bp Ori: BCI69057.1 Feature: domain Description: PHA02517 Location: 36085-36532 bp Feature: domain Description: PHA02 517 Location: 36085-36532 bp Feature: gene Location: 36635-38146 bp Ori: BCI69058.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36893-37622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36893-3762 2 bp Feature: domain Description: GIIM Note: maturase Location: 37697-37925 bp Feature: domain Description: GIIM Note: maturase Location: 37697-3792 5 bp Feature: gene Location: 38255-38449 bp Feature: gene Location: 38652-38939 bp Ori: BCI69060.1 Feature: domain Description: PHA02517 Location: 38655-38814 bp Feature: domain Description: PHA02 517 Location: 38655-38814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: AP023326.1 Acetobacter aceti JCM20276 DNA, complete genome (3743357 bp)
Overview 1 RT 1: 424867-428895 bp 2 RT 2: 3550702-3554062 bp 3 RT 3: 3576590-3579629 bp Neighborhood of RT #1 [424867, 428936] InsE HTH_21 PHA02517 RVT-GII RVT-GII GIIM PHA02517 PsiE Neighborhood of RT #2 [3550702, 3554307] EF-hand_7 EF-hand_7 PHA02517 RVT-GII HTH_21 Neighborhood of RT #3 [3576590, 3579706] HTH_21 RVT-GII GIIM PHA02517 Feature: gene Location: 424867-425190 bp Ori: BCI65786.1 Feature: domain Description: InsE Location: 424876-425176 bp Feature: domain Description: InsE Location: 424876-425176 bp Feature: gene Location: 425187-425744 bp Ori: BCI65787.1 Feature: domain Description: HTH_21 Location: 425202-425250 bp Feature: domain Description: HTH_21 Location: 425202-425250 bp Feature: domain Description: PHA02517 Location: 425250-425619 bp Feature: domain Description: PHA02517 Location: 425250-425619 bp Feature: gene Location: 426249-427088 bp Ori: BCI65788.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426507-426984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426507-426984 bp Feature: gene Location: 427036-427761 bp Ori: BCI65789.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427054-427237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 427054-42723 7 bp Feature: domain Description: GIIM Note: maturase Location: 427312-427540 bp Feature: domain Description: GIIM Note: maturase Location: 4273 12-427540 bp Feature: gene Location: 427841-428341 bp Ori: BCI65790.1 Feature: domain Description: PHA02517 Location: 427847-428261 bp Feature: domain Description: PHA02517 Location: 427847-428261 bp Feature: gene Location: 428487-428936 bp Ori: BCI65791.1 Feature: domain Description: PsiE Location: 428685-428895 bp Feature: domain Description: PsiE Location: 428685-428895 bp Feature: gene Location: 3550702-3551061 bp Ori: BCI68746.1 Feature: domain Description: EF-hand_7 Location: 3550843-3550903 bp Feature: domain Description: EF-hand_7 Location: 3 550843 -3 550903 bp Feature: domain Description: EF-hand_7 Location: 3550981-3551047 bp Feature: domain Description: EF-hand_7 Location: 3 550981-3 551047 bp Feature: gene Location: 3551221-3551673 bp Ori: BCI68747.1 Feature: domain Description: PHA02517 Location: 3551224-3551671 bp Feature: domain Description: PHA02517 Location: 3 551224-3 551671 bp Feature: gene Location: 3552203-3553282 bp Ori: BCI68748.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3552461-3553190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 552461-3 553 190 bp Feature: gene Location: 3553391-3553585 bp Feature: gene Location: 3553789-3554307 bp Ori: BCI68750.1 Feature: domain Description: HTH_21 Location: 3553894-3554062 bp Feature: domain Description: HTH_21 Location: 3 553 894-3 554062 bp Feature: gene Location: 3576590-3577108 bp Ori: BCI68770.1 Feature: domain Description: HTH_21 Location: 3576695-3576863 bp Feature: domain Description: HTH_21 Location: 3 576695-3 576863 bp Feature: gene Location: 3577331-3577579 bp Feature: gene Location: 3577614-3578735 bp Ori: BCI68772.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3577872-3578601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 577872-3 578601 bp Feature: gene Location: 3578737-3579126 bp Ori: BCI68773.1 Feature: domain Description: GIIM Note: maturase Location: 3578740-3578905 bp Feature: domain Description: GIIM Note: maturase Location: 3 578740-3 578905 bp Feature: gene Location: 3579206-3579706 bp Ori: BCI68774.1 Feature: domain Description: PHA02517 Location: 3579212-3579629 bp Feature: domain Description: PHA02517 Location: 3 579212-3 579629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), HTH_21 (pfam13276), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PsiE (pfam06146), EF-hand_7 (pfam13499)