myRT

myRT report for GCA_014218335.1_ASM1421833v1

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Seq: AP023367.1 Anaerocolumna cellulosilytica SN021 DNA, complete genome (5430627 bp)
Overview 1 RT 1: 461668-468517 bp 2 RT 2: 2014607-2017056 bp 3 RT 3: 3214758-3222536 bp 4 RT 4: 4748017-4756811 bp Neighborhood of RT #1 [461668, 468576] YebA Fes CBD_II RVT-GII GIIM TelA Halogen_Hydrol Neighborhood of RT #2 [2014607, 2017056] yhbS RVT-GII Neighborhood of RT #3 [3214758, 3222538] MutS MutS RVT-GII GIIM PRK13914 SH3_3 Spr Spore_IV_A Neighborhood of RT #4 [4748017, 4756811] RVT-GII HNHc Feature: gene Location: 461668-462501 bp Ori: BCJ92853.1 Feature: domain Description: YebA Location: 461782-462286 bp Feature: domain Description: YebA Location: 461 782-462286 bp Feature: gene Location: 462808-464001 bp Ori: BCJ92854.1 Feature: domain Description: Fes Location: 462901-463639 bp Feature: domain Description: Fes Location: 462901 -463639 bp Feature: domain Description: CBD_II Location: 463738-463987 bp Feature: domain Description: CBD_II Location: 463738-463987 bp Feature: gene Location: 464520-465932 bp Ori: BCJ92855.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464874-465492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464874-465492 bp Feature: domain Description: GIIM Note: maturase Location: 465543-465768 bp Feature: domain Description: GIIM Note: maturase Location: 465543-465768 bp Feature: gene Location: 466090-467223 bp Ori: BCJ92856.1 Feature: domain Description: TelA Location: 466234-467209 bp Feature: domain Description: TelA Location: 466234-467209 bp Feature: gene Location: 467239-468576 bp Ori: BCJ92857.1 Feature: domain Description: Halogen_Hydrol Location: 467710-468517 bp Feature: domain Description: Halogen_Hydrol Location: 46771 0-46851 7 bp Feature: gene Location: 2014607-2015203 bp Ori: BCJ94133.1 Feature: domain Description: yhbS Location: 2014613-2015135 bp Feature: domain Description: yhbS Location: 201 461 3-201 51 35 bp Feature: gene Location: 2015517-2015693 bp Feature: gene Location: 2015765-2016643 bp Ori: BCJ94135.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2015966-2016584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201 5966-201 6584 bp Feature: gene Location: 2016604-2016738 bp Feature: gene Location: 2016775-2017056 bp Feature: gene Location: 3214758-3215588 bp Feature: gene Location: 3215635-3217308 bp Ori: BCJ95070.1 Feature: domain Description: MutS Location: 3215872-3216064 bp Feature: domain Description: MutS Location: 321 5872-321 6064 bp Feature: domain Description: MutS Location: 3216436-3217285 bp Feature: domain Description: MutS Location: 321 6436-321 7285 bp Feature: gene Location: 3217665-3219077 bp Ori: BCJ95071.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3218019-3218637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321 801 9-321 8637 bp Feature: domain Description: GIIM Note: maturase Location: 3218688-3218913 bp Feature: domain Description: GIIM Note: maturase Location: 321 8688-321 891 3 bp Feature: gene Location: 3219541-3220593 bp Ori: BCJ95072.1 Feature: domain Description: PRK13914 Location: 3219799-3219955 bp Feature: domain Description: PRK1 391 4 Location: 321 9799-321 9955 bp Feature: domain Description: SH3_3 Location: 3220024-3220171 bp Feature: domain Description: SH3_3 Location: 3220024-32201 71 bp Feature: domain Description: Spr Location: 3220192-3220549 bp Feature: domain Description: Spr Location: 32201 92-3220549 bp Feature: gene Location: 3221030-3222538 bp Ori: BCJ95073.1 Feature: domain Description: Spore_IV_A Location: 3221075-3222536 bp Feature: domain Description: Spore_IV_A Location: 3221 075-3222536 bp Feature: gene Location: 4748017-4751790 bp Feature: gene Location: 4752346-4752510 bp Feature: gene Location: 4752531-4754417 bp Ori: BCJ96357.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4752846-4753575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4752846-4753575 bp Feature: domain Description: HNHc Note: nucleases Location: 4754160-4754298 bp Feature: domain Description: HNHc Note: nucleases Location: 47541 60-4754298 bp Feature: gene Location: 4754617-4754874 bp Feature: gene Location: 4755144-4756811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YebA (COG1305), Fes (COG2382), CBD_II (smart00637), RVT-GII, GIIM (pfam08388), TelA (pfam05816), Halogen_Hydrol (pfam10112), yhbS (COG3153), MutS (COG0249), PRK13914 (invasion associated endopeptidase)
SH3_3 (pfam08239), Spr (COG0791), Spore_IV_A (pfam09547), HNHc (smart00507)