myRT

myRT report for GCA_014334135.1_ASM1433413v1

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Seq: CP060497.1 Olivibacter sp. SDN3 chromosome, complete genome (6118654 bp)
Overview 1 RT 1: 229706-233814 bp 2 RT 2: 3635332-3641277 bp 3 RT 3: 5680820-5685782 bp 4 RT 4: 5692443-5696584 bp Neighborhood of RT #1 [229706, 233814] RVT-GII Intron_maturas2 HNHc DUF932 Neighborhood of RT #2 [3635332, 3641277] QueC QueC DpnII-MboI RVT-UG2 Neighborhood of RT #3 [5680820, 5685787] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc CtnDOT_TraJ Bac_Flav_CT_K Neighborhood of RT #4 [5692443, 5696584] DUF932 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 229706-230080 bp Feature: gene Location: 230130-230396 bp Feature: gene Location: 230389-232197 bp Ori: QNL50254.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230653-231475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 230653-231 475 bp Feature: domain Description: Intron_maturas2 Location: 231553-231886 bp Feature: domain Description: Intron_maturas2 Location: 231 553-231 886 bp Feature: domain Description: HNHc Note: nucleases Location: 232030-232177 bp Feature: domain Description: HNHc Note: nucleases Location: 232030-2321 77 bp Feature: gene Location: 232767-233654 bp Feature: domain Description: DUF932 Location: 233019-233655 bp Feature: domain Description: DUF932 Location: 23301 9-233655 bp Feature: gene Location: 233632-233814 bp Feature: gene Location: 3635332-3636120 bp Feature: gene Location: 3636113-3638002 bp Ori: QNL48136.1 Feature: domain Description: QueC Location: 3636590-3636677 bp Feature: domain Description: QueC Location: 3636590-3636677 bp Feature: domain Description: QueC Location: 3637043-3637229 bp Feature: domain Description: QueC Location: 3637043-3637229 bp Feature: domain Description: DpnII-MboI Location: 3637655-3637976 bp Feature: domain Description: DpnII-MboI Location: 3637655-3637976 bp Feature: gene Location: 3638028-3639623 bp Ori: QNL52552.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3638283-3639210 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3638283-363921 0 bp Feature: gene Location: 3639759-3639920 bp Feature: gene Location: 3640030-3641277 bp Feature: gene Location: 5680820-5681446 bp Feature: gene Location: 5681452-5682366 bp Gene: traJ Feature: domain Description: Bac_Flav_CT_J Location: 5681548-5682367 bp Feature: domain Description: Bac_Flav_CT_J Location: 5681 548-5682367 bp Feature: gene Location: 5682933-5684819 bp Ori: QNL52670.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5683197-5684019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56831 97-568401 9 bp Feature: domain Description: Intron_maturas2 Location: 5684100-5684397 bp Feature: domain Description: Intron_maturas2 Location: 56841 00-5684397 bp Feature: domain Description: HNHc Note: nucleases Location: 5684571-5684715 bp Feature: domain Description: HNHc Note: nucleases Location: 5684571 -568471 5 bp Feature: gene Location: 5684824-5685162 bp Ori: QNL49717.1 Feature: domain Description: CtnDOT_TraJ Location: 5684857-5685022 bp Feature: domain Description: CtnDOT_TraJ Location: 5684857-5685022 bp Feature: gene Location: 5685185-5685787 bp Ori: QNL49718.1 Gene: traK Feature: domain Description: Bac_Flav_CT_K Location: 5685203-5685782 bp Feature: domain Description: Bac_Flav_CT_K Location: 5685203-5685782 bp Feature: gene Location: 5692443-5692628 bp Feature: gene Location: 5692606-5693550 bp Ori: QNL49729.1 Feature: domain Description: DUF932 Location: 5692885-5693527 bp Feature: domain Description: DUF932 Location: 5692885-5693527 bp Feature: gene Location: 5694088-5695896 bp Ori: QNL49730.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5694352-5695174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5694352-56951 74 bp Feature: domain Description: Intron_maturas2 Location: 5695252-5695585 bp Feature: domain Description: Intron_maturas2 Location: 5695252-5695585 bp Feature: domain Description: HNHc Note: nucleases Location: 5695729-5695876 bp Feature: domain Description: HNHc Note: nucleases Location: 5695729-5695876 bp Feature: gene Location: 5695889-5696155 bp Feature: gene Location: 5696204-5696584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF932 (pfam06067), QueC (pfam06508), DpnII-MboI (pfam18742), RVT-UG2, Bac_Flav_CT_J (TIGR03782), CtnDOT_TraJ (pfam07863), Bac_Flav_CT_K (TIGR03781)