myRT

myRT report for GCA_014361115.1_ASM1436111v1

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Seq: CP060744.1 Klebsiella pneumoniae strain KP120 chromosome, complete genome (5356970 bp)
Overview 1 RT 1: 1862298-1869015 bp 2 RT 2: 2171447-2176861 bp 3 RT 3: 4577880-4585611 bp Neighborhood of RT #1 [1862298, 1869017] PRK09257 Porin_1 RVT-GII GIIM PRK10002 asnC Neighborhood of RT #2 [2171447, 2176863] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [4577880, 4586345] umuC PRK10276 RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 COG0610 Feature: gene Location: 1862298-1863488 bp Ori: QNN13615.1 Feature: domain Description: PRK09257 Location: 1862301-1863486 bp Feature: domain Description: PRK09257 Location: 1 862301 -1 863486 bp Feature: gene Location: 1863676-1864578 bp Gene: ompK35 Feature: domain Description: Porin_1 Location: 1863679-1864576 bp Feature: domain Description: Porin_1 Location: 1 863679-1 864576 bp Feature: gene Location: 1864671-1866179 bp Ori: QNN14449.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1864929-1865661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 864929-1 865661 bp Feature: domain Description: GIIM Note: maturase Location: 1865736-1865934 bp Feature: domain Description: GIIM Note: maturase Location: 1 865736-1 865934 bp Feature: gene Location: 1866786-1867025 bp Ori: QNN14628.1 Feature: domain Description: PRK10002 Location: 1866789-1866981 bp Feature: domain Description: PRK1 0002 Location: 1 866789-1 866981 bp Feature: gene Location: 1867617-1869017 bp Ori: QNN13616.1 Gene: asnS Feature: domain Description: asnC Location: 1867623-1869015 bp Feature: domain Description: asnC Location: 1 867623-1 86901 5 bp Feature: gene Location: 2171447-2172583 bp Ori: QNN14474.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2171627-2172530 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 71 627-21 72530 bp Feature: gene Location: 2172754-2172996 bp Ori: QNN13906.1 Feature: domain Description: DinI Location: 2172805-2172985 bp Feature: domain Description: DinI Location: 21 72805-21 72985 bp Feature: gene Location: 2173287-2174774 bp Ori: QNN13907.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2173692-2174382 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 73692-21 74382 bp Feature: gene Location: 2175176-2175595 bp Ori: QNN13908.1 Gene: umuD Feature: domain Description: PRK10276 Location: 2175179-2175590 bp Feature: domain Description: PRK1 0276 Location: 21 751 79-21 75590 bp Feature: gene Location: 2175598-2176863 bp Ori: QNN13909.1 Feature: domain Description: umuC Location: 2175601-2176861 bp Feature: domain Description: umuC Location: 21 75601 -21 76861 bp Feature: gene Location: 4577880-4579151 bp Ori: QNN11301.1 Gene: umuC Feature: domain Description: umuC Location: 4577883-4579149 bp Feature: domain Description: umuC Location: 4577883-45791 49 bp Feature: gene Location: 4579154-4579669 bp Ori: QNN11302.1 Gene: umuD Feature: domain Description: PRK10276 Location: 4579280-4579649 bp Feature: domain Description: PRK1 0276 Location: 4579280-4579649 bp Feature: gene Location: 4580071-4581558 bp Ori: QNN11303.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4580476-4581166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4580476-4581 1 66 bp Feature: gene Location: 4581815-4583083 bp Ori: QNN11304.1 Feature: domain Description: zf-ISL3 Location: 4581914-4582046 bp Feature: domain Description: zf-ISL3 Location: 4581 91 4-4582046 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 4582067-4582211 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 4582067-458221 1 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 4582259-4582943 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 4582259-4582943 bp Feature: gene Location: 4583088-4586345 bp Ori: QNN11305.1 Feature: domain Description: COG0610 Location: 4583109-4585611 bp Feature: domain Description: COG061 0 Location: 45831 09-458561 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09257 (aromatic amino acid transaminase), Porin_1 (pfam00267), RVT-GII, GIIM (pfam08388), PRK10002 (porin OmpF), asnC (PRK03932), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)
zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )