myRT

myRT report for GCA_014394985.1_ASM1439498v1

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Seq: CP060730.1 Salmonella enterica subsp. enterica serovar Albany strain R17.5974 chromosome, complete genome (5024703 bp)
Overview 1 RT 1: 2698-4881 bp 2 RT 2: 338461-344269 bp Neighborhood of RT #1 [2698, 4881] HTH_XRE RVT-Retrons Neighborhood of RT #2 [338461, 344277] groES groEL RVT_N RVT-GII GIIM HNHc DUF4156 Feature: gene Location: 2698-2853 bp Feature: gene Location: 2890-3198 bp Ori: QNN37703.1 Feature: domain Description: HTH_XRE Location: 2902-3067 bp Feature: domain Description: HTH_XRE Location: 2902-3067 bp Feature: gene Location: 3176-4126 bp Ori: QNN37704.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3899 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3356-3899 bp Feature: gene Location: 4251-4688 bp Feature: gene Location: 4687-4881 bp Feature: gene Location: 338461-338754 bp Ori: QNN37972.1 Feature: domain Description: groES Location: 338464-338749 bp Feature: domain Description: groES Location: 338464-338749 bp Feature: gene Location: 338798-340444 bp Ori: QNN37973.1 Gene: groL Feature: domain Description: groEL Location: 338804-340430 bp Feature: domain Description: groEL Location: 338804-340430 bp Feature: gene Location: 341536-343233 bp Ori: QNN37974.1 Gene: ltrA Feature: domain Description: RVT_N Location: 341599-341833 bp Feature: domain Description: RVT_N Location: 341 599-341 833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341887-342532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 887-342532 bp Feature: domain Description: GIIM Note: maturase Location: 342586-342817 bp Feature: domain Description: GIIM Note: maturase Location: 342586-34281 7 bp Feature: domain Description: HNHc Note: nucleases Location: 343027-343183 bp Feature: domain Description: HNHc Note: nucleases Location: 343027-3431 83 bp Feature: gene Location: 343238-343561 bp Feature: gene Location: 343924-344277 bp Ori: QNN37976.1 Feature: domain Description: DUF4156 Location: 343993-344269 bp Feature: domain Description: DUF41 56 Location: 343993-344269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4156 (pfam13698)