myRT

myRT report for GCA_014490825.1_ASM1449082v1

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Seq: CP060733.1 Enterobacter roggenkampii strain Ed-982 chromosome, complete genome (4815629 bp)
Overview 1 RT 1: 939077-955914 bp Neighborhood of RT #1 [939077, 955919] pfam14252 Big_9 Big_9 Big_9 tand_rpt_95 Big_9 tand_rpt_95 Big_9 Cadherin_4 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 Big_9 DDE_Tnp_IS1 RVT-GII fruct_sucro_rep Feature: gene Location: 939077-952456 bp Ori: QNQ25935.1 Feature: domain Description: pfam14252 Location: 939308-939752 bp Feature: domain Description: pfam1 4252 Location: 939308-939752 bp Feature: domain Description: Big_9 Location: 940124-940469 bp Feature: domain Description: Big_9 Location: 9401 24-940469 bp Feature: domain Description: Big_9 Location: 940496-940826 bp Feature: domain Description: Big_9 Location: 940496-940826 bp Feature: domain Description: Big_9 Location: 940856-941192 bp Feature: domain Description: Big_9 Location: 940856-941 1 92 bp Feature: domain Description: tand_rpt_95 Location: 941615-941807 bp Feature: domain Description: tand_rpt_95 Location: 941 61 5-941 807 bp Feature: domain Description: Big_9 Location: 942212-942635 bp Feature: domain Description: Big_9 Location: 94221 2-942635 bp Feature: domain Description: tand_rpt_95 Location: 943610-943748 bp Feature: domain Description: tand_rpt_95 Location: 94361 0-943748 bp Feature: domain Description: Big_9 Location: 944780-945167 bp Feature: domain Description: Big_9 Location: 944780-9451 67 bp Feature: domain Description: Cadherin_4 Location: 945311-945473 bp Feature: domain Description: Cadherin_4 Location: 94531 1 -945473 bp Feature: domain Description: Big_9 Location: 945797-946037 bp Feature: domain Description: Big_9 Location: 945797-946037 bp Feature: domain Description: Big_9 Location: 946049-946373 bp Feature: domain Description: Big_9 Location: 946049-946373 bp Feature: domain Description: Big_9 Location: 946391-946637 bp Feature: domain Description: Big_9 Location: 946391 -946637 bp Feature: domain Description: Big_9 Location: 946646-946961 bp Feature: domain Description: Big_9 Location: 946646-946961 bp Feature: domain Description: Big_9 Location: 946985-947225 bp Feature: domain Description: Big_9 Location: 946985-947225 bp Feature: domain Description: Big_9 Location: 947234-947555 bp Feature: domain Description: Big_9 Location: 947234-947555 bp Feature: domain Description: Big_9 Location: 947573-947816 bp Feature: domain Description: Big_9 Location: 947573-94781 6 bp Feature: domain Description: Big_9 Location: 947834-948140 bp Feature: domain Description: Big_9 Location: 947834-9481 40 bp Feature: domain Description: Big_9 Location: 948155-948401 bp Feature: domain Description: Big_9 Location: 9481 55-948401 bp Feature: domain Description: Big_9 Location: 948413-948734 bp Feature: domain Description: Big_9 Location: 94841 3-948734 bp Feature: domain Description: Big_9 Location: 948752-948992 bp Feature: domain Description: Big_9 Location: 948752-948992 bp Feature: domain Description: Big_9 Location: 949004-949322 bp Feature: domain Description: Big_9 Location: 949004-949322 bp Feature: domain Description: Big_9 Location: 949340-949580 bp Feature: domain Description: Big_9 Location: 949340-949580 bp Feature: domain Description: Big_9 Location: 949601-949901 bp Feature: domain Description: Big_9 Location: 949601 -949901 bp Feature: domain Description: Big_9 Location: 949919-950162 bp Feature: domain Description: Big_9 Location: 94991 9-9501 62 bp Feature: domain Description: Big_9 Location: 950174-950480 bp Feature: domain Description: Big_9 Location: 9501 74-950480 bp Feature: domain Description: Big_9 Location: 950504-950741 bp Feature: domain Description: Big_9 Location: 950504-950741 bp Feature: domain Description: Big_9 Location: 950756-951059 bp Feature: domain Description: Big_9 Location: 950756-951 059 bp Feature: domain Description: Big_9 Location: 951461-951800 bp Feature: domain Description: Big_9 Location: 951 461 -951 800 bp Feature: gene Location: 952959-953267 bp Feature: domain Description: DDE_Tnp_IS1 Location: 952965-953262 bp Feature: domain Description: DDE_Tnp_IS1 Location: 952965-953262 bp Feature: gene Location: 953650-954481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953656-953863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 953656-953863 bp Feature: gene Location: 954646-954779 bp Feature: gene Location: 954915-955919 bp Ori: QNQ25936.1 Feature: domain Description: fruct_sucro_rep Location: 954936-955914 bp Feature: domain Description: fruct_sucro_rep Location: 954936-95591 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam14252 (DUF4347;Domain of unknown function (DUF4347)), Big_9 (pfam17963), tand_rpt_95 (NF012211), Cadherin_4 (pfam17803), DDE_Tnp_IS1 (pfam03400), RVT-GII, fruct_sucro_rep (TIGR02417)

Seq: CP060734.1 Enterobacter roggenkampii strain Ed-982 plasmid pEr982-1, complete sequence (108025 bp)
Overview 1 RT 1: 91492-96064 bp Neighborhood of RT #1 [91492, 96494] HTH_38 Tra8 PHA02517 RVT-GII PHA02517 InsA Feature: gene Location: 91492-92643 bp Ori: QNQ27438.1 Feature: domain Description: HTH_38 Location: 91501-91615 bp Feature: domain Description: HTH_38 Location: 91501-91615 bp Feature: domain Description: Tra8 Location: 91651-92632 bp Feature: domain Description: Tra8 Location: 91651-92 632 bp Feature: gene Location: 92708-93133 bp Feature: domain Description: PHA02517 Location: 92798-93134 bp Feature: domain Description: PHA02 517 Location: 92 798-93134 bp Feature: gene Location: 93806-95312 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94064-94697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94064-94697 bp Feature: gene Location: 95393-95779 bp Feature: domain Description: PHA02517 Location: 95396-95780 bp Feature: domain Description: PHA02 517 Location: 95396-95780 bp Feature: gene Location: 95797-96494 bp Feature: domain Description: InsA Location: 95803-96064 bp Feature: domain Description: InsA Location: 95803-96064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, InsA (COG3677)