myRT

myRT report for GCA_014495785.1_ASM1449578v1

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Seq: CP061062.1 Klebsiella pneumoniae strain HKP0018 chromosome, complete genome (5468853 bp)
Overview 1 RT 1: 2265382-2270683 bp Neighborhood of RT #1 [2265382, 2270688] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 2265382-2266347 bp Feature: domain Description: PRK15110 Location: 2265385-2266345 bp Feature: domain Description: PRK1 51 1 0 Location: 2265385-2266345 bp Feature: gene Location: 2266552-2267220 bp Feature: domain Description: PRK09951 Location: 2266555-2267218 bp Feature: domain Description: PRK09951 Location: 2266555-226721 8 bp Feature: gene Location: 2267421-2268329 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 2267694-2268150 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 2267694-22681 50 bp Feature: gene Location: 2269002-2270267 bp Feature: domain Description: umuC Location: 2269005-2270265 bp Feature: domain Description: umuC Location: 2269005-2270265 bp Feature: gene Location: 2270269-2270688 bp Feature: domain Description: PRK10276 Location: 2270272-2270683 bp Feature: domain Description: PRK1 0276 Location: 2270272-2270683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP061064.1 Klebsiella pneumoniae strain HKP0018 plasmid pHKP0018.2, complete sequence (66330 bp)
Overview 1 RT 1: 3941-8383 bp Neighborhood of RT #1 [3941, 8385] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 3941-5212 bp Feature: domain Description: umuC Location: 3944-5204 bp Feature: domain Description: umuC Location: 3944-52 04 bp Feature: gene Location: 5212-6024 bp Feature: domain Description: PRK10276 Location: 5644-6007 bp Feature: domain Description: PRK102 76 Location: 5644-6007 bp Feature: gene Location: 6049-7536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6454-7144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6454-7144 bp Feature: gene Location: 7688-7963 bp Feature: domain Description: InsA Location: 7691-7955 bp Feature: domain Description: InsA Location: 7691-7955 bp Feature: gene Location: 7882-8385 bp Feature: domain Description: DDE_Tnp_IS1 Location: 7993-8383 bp Feature: domain Description: DDE_Tnp_IS1 Location: 7993-8383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: CP061067.1 Klebsiella pneumoniae strain HKP0018 plasmid pHKP0018.5, complete sequence (8428 bp)
Overview 1 RT 1: 3-2561 bp Neighborhood of RT #1 [3, 2561] CspC RVT-Retrons Feature: gene Location: 3-275 bp Feature: gene Location: 484-687 bp Feature: domain Description: CspC Location: 487-682 bp Feature: domain Description: CspC Location: 487-682 bp Feature: gene Location: 692-1831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 836-1391 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83 6-13 91 bp Feature: gene Location: 1853-2035 bp Feature: gene Location: 2415-2561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons