myRT

myRT report for GCA_014524585.1_ASM1452458v1

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Seq: CP060132.1 Salmonella enterica subsp. enterica serovar London strain HA3-IN1, complete sequence (4746179 bp)
Overview 1 RT 1: 2985372-2992329 bp Neighborhood of RT #1 [2985372, 2992329] P Q RVT-Retrons Feature: gene Location: 2985372-2987138 bp Ori: QNR28803.1 Feature: domain Description: P Location: 2985399-2987133 bp Feature: domain Description: P Location: 2985399-29871 33 bp Feature: gene Location: 2987138-2988169 bp Ori: QNR28804.1 Feature: domain Description: Q Location: 2987141-2988164 bp Feature: domain Description: Q Location: 29871 41 -29881 64 bp Feature: gene Location: 2988219-2989976 bp Ori: QNR28805.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2988363-2988984 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2988363-2988984 bp Feature: gene Location: 2990538-2991839 bp Feature: gene Location: 2992097-2992329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: CP060133.1 Salmonella enterica subsp. enterica serovar London strain HA3-IN1 plasmid pYUHAP1,complete sequence (176767 bp)
Overview 1 RT 1: 69173-75502 bp Neighborhood of RT #1 [69173, 75502] ArdC ArdC RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 69173-70138 bp Ori: QNR30560.1 Feature: domain Description: ArdC Location: 69299-70133 bp Feature: domain Description: ArdC Location: 692 99-70133 bp Feature: gene Location: 70618-71583 bp Ori: QNR30561.1 Feature: domain Description: ArdC Location: 70744-71578 bp Feature: domain Description: ArdC Location: 70744-71578 bp Feature: gene Location: 72053-73537 bp Ori: QNR30562.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72455-73145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 455-73145 bp Feature: gene Location: 73945-75165 bp Ori: QNR30563.1 Feature: domain Description: zf-ISL3 Location: 74077-74203 bp Feature: domain Description: zf-ISL3 Location: 74077-742 03 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 74221-74368 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 742 2 1-74368 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 74419-75124 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 74419-7512 4 bp Feature: gene Location: 75263-75502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)