myRT

myRT report for GCA_014524605.1_ASM1452460v1

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Seq: CP060135.1 Salmonella enterica subsp. enterica serovar London strain HA1-SP5 plasmid pYUHAP5-1,complete sequence (112916 bp)
Overview 1 RT 1: 96801-103130 bp Neighborhood of RT #1 [96801, 103130] ArdC ArdC RVT-GII zf-ISL3 HTH_Tnp_ISL3 DDE_Tnp_ISL3 Feature: gene Location: 96801-97766 bp Ori: QNR35095.1 Feature: domain Description: ArdC Location: 96927-97761 bp Feature: domain Description: ArdC Location: 96927-97761 bp Feature: gene Location: 98246-99211 bp Ori: QNR35096.1 Feature: domain Description: ArdC Location: 98372-99206 bp Feature: domain Description: ArdC Location: 98372-99206 bp Feature: gene Location: 99681-101165 bp Ori: QNR35097.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100083-100773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00083-1 00773 bp Feature: gene Location: 101573-102793 bp Ori: QNR35098.1 Gene: tnpA Feature: domain Description: zf-ISL3 Location: 101705-101831 bp Feature: domain Description: zf-ISL3 Location: 1 01 705-1 01 831 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 101849-101996 bp Feature: domain Description: HTH_Tnp_ISL3 Location: 1 01 849-1 01 996 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 102047-102752 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 1 02047-1 02752 bp Feature: gene Location: 102891-103130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, zf-ISL3 (pfam14690), HTH_Tnp_ISL3 (pfam13542), DDE_Tnp_ISL3 (pfam01610)

Seq: CP060134.1 Salmonella enterica subsp. enterica serovar London strain HA1-SP5,complete sequence (4747268 bp)
Overview 1 RT 1: 2985375-2992332 bp Neighborhood of RT #1 [2985375, 2992332] P Q RVT-Retrons Feature: gene Location: 2985375-2987141 bp Ori: QNR33333.1 Feature: domain Description: P Location: 2985402-2987136 bp Feature: domain Description: P Location: 2 985402 -2 987136 bp Feature: gene Location: 2987141-2988172 bp Ori: QNR33334.1 Feature: domain Description: Q Location: 2987144-2988167 bp Feature: domain Description: Q Location: 2 987144-2 988167 bp Feature: gene Location: 2988222-2989979 bp Ori: QNR33335.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2988366-2988987 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 988366-2 988987 bp Feature: gene Location: 2990541-2991842 bp Feature: gene Location: 2992100-2992332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons