myRT

myRT report for GCA_014622645.1_ASM1462264v1

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Seq: CP061199.1 Piscirickettsia salmonis strain Ps12201A plasmid ps12201A.p6, complete sequence (33836 bp)
Overview 1 RT 1: 1087-4373 bp Neighborhood of RT #1 [1087, 4486] HTH_21 RVT-GII InsE Y2_Tnp Feature: gene Location: 1087-1323 bp Feature: gene Location: 1475-1606 bp Ori: QNR82496.1 Feature: domain Description: HTH_21 Location: 1487-1595 bp Feature: domain Description: HTH_21 Location: 1 487-1 595 bp Feature: gene Location: 1698-3101 bp Ori: QNR82497.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1980-2658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 980-2658 bp Feature: domain Description: InsE Location: 2796-3045 bp Feature: domain Description: InsE Location: 2796-3045 bp Feature: gene Location: 3298-3468 bp Feature: gene Location: 3788-4486 bp Ori: QNR82499.1 Feature: domain Description: Y2_Tnp Location: 3875-4373 bp Feature: domain Description: Y2_Tnp Location: 3875-4373 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, InsE (COG2963), Y2_Tnp (pfam04986)

Seq: CP061189.1 Piscirickettsia salmonis strain Ps12201A chromosome, complete genome (3177257 bp)
Overview 1 RT 1: 124570-128490 bp 2 RT 2: 1299056-1303068 bp 3 RT 3: 1460184-1465563 bp 4 RT 4: 1992031-1996520 bp 5 RT 5: 2095723-2100195 bp 6 RT 6: 2238340-2241489 bp 7 RT 7: 2333852-2335978 bp Neighborhood of RT #1 [124570, 128606] HTH_Tnp_IS630 RVT-GII Zn_Tnp_IS91 Neighborhood of RT #2 [1299056, 1303223] HTH_Tnp_IS630 Y2_Tnp RVT-GII InsE Zn_Tnp_IS91 Neighborhood of RT #3 [1460184, 1465640] DDE_3 Y2_Tnp RVT-GII InsE PHA02517 RVT-GII DDE_3 Neighborhood of RT #4 [1992031, 1996520] Zn_Tnp_IS91 RVT-GII Y2_Tnp Neighborhood of RT #5 [2095723, 2100254] beta_CA_cladeB Zn_Tnp_IS91 RVT-GII Tra5 HTH_Tnp_1 Neighborhood of RT #6 [2238340, 2241509] Zn_Tnp_IS91 RVT-GII MDR_like_2 Neighborhood of RT #7 [2333852, 2336055] Zn_Tnp_IS91 RVT-GII HTH_Tnp_IS630 DDE_3 Feature: gene Location: 124570-125456 bp Feature: domain Description: HTH_Tnp_IS630 Location: 124585-124930 bp Feature: domain Description: HTH_Tnp_IS630 Location: 12 4585-12 4930 bp Feature: gene Location: 125732-125983 bp Feature: gene Location: 126779-127999 bp Ori: QNR80592.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126962-127640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6962 -12 7640 bp Feature: gene Location: 128081-128266 bp Feature: gene Location: 128211-128606 bp Ori: QNR80593.1 Feature: domain Description: Zn_Tnp_IS91 Location: 128298-128490 bp Feature: domain Description: Zn_Tnp_IS91 Location: 12 82 98-12 8490 bp Feature: gene Location: 1299056-1299421 bp Ori: QNR81654.1 Feature: domain Description: HTH_Tnp_IS630 Location: 1299071-1299410 bp Feature: domain Description: HTH_Tnp_IS630 Location: 12 99071-12 99410 bp Feature: gene Location: 1299443-1299772 bp Ori: QNR81655.1 Feature: domain Description: Y2_Tnp Location: 1299530-1299677 bp Feature: domain Description: Y2 _Tnp Location: 12 99530-12 99677 bp Feature: gene Location: 1300181-1300741 bp Ori: QNR81656.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300463-1300712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300463-1300712 bp Feature: gene Location: 1301167-1302287 bp Feature: domain Description: InsE Location: 1301170-1301422 bp Feature: domain Description: InsE Location: 1301170-130142 2 bp Feature: gene Location: 1302813-1303223 bp Ori: QNR81657.1 Feature: domain Description: Zn_Tnp_IS91 Location: 1302834-1303068 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1302 834-1303068 bp Feature: gene Location: 1460184-1460753 bp Ori: QNR81792.1 Feature: domain Description: DDE_3 Location: 1460283-1460676 bp Feature: domain Description: DDE_3 Location: 14602 83-1460676 bp Feature: gene Location: 1461091-1461588 bp Ori: QNR81793.1 Feature: domain Description: Y2_Tnp Location: 1461178-1461550 bp Feature: domain Description: Y2 _Tnp Location: 1461178-1461550 bp Feature: gene Location: 1462068-1462607 bp Ori: QNR81794.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462284-1462512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1462 2 84-1462 512 bp Feature: gene Location: 1462567-1463718 bp Feature: domain Description: InsE Location: 1462573-1462828 bp Feature: domain Description: InsE Location: 1462 573-1462 82 8 bp Feature: domain Description: PHA02517 Location: 1463149-1463704 bp Feature: domain Description: PHA02 517 Location: 1463149-1463704 bp Feature: gene Location: 1463721-1464413 bp Ori: QNR82008.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463745-1464210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463745-14642 10 bp Feature: gene Location: 1464618-1464875 bp Feature: gene Location: 1465065-1465640 bp Ori: QNR82010.1 Feature: domain Description: DDE_3 Location: 1465170-1465563 bp Feature: domain Description: DDE_3 Location: 1465170-1465563 bp Feature: gene Location: 1992031-1992588 bp Feature: gene Location: 1992777-1993175 bp Ori: QNR79485.1 Feature: domain Description: Zn_Tnp_IS91 Location: 1992789-1993020 bp Feature: domain Description: Zn_Tnp_IS91 Location: 1992 789-199302 0 bp Feature: gene Location: 1993231-1994598 bp Ori: QNR79486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993513-1994194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1993513-1994194 bp Feature: gene Location: 1995007-1995822 bp Ori: QNR79487.1 Feature: domain Description: Y2_Tnp Location: 1995094-1995595 bp Feature: domain Description: Y2 _Tnp Location: 1995094-1995595 bp Feature: gene Location: 1995984-1996520 bp Feature: gene Location: 2095723-2096385 bp Ori: QNR79576.1 Feature: domain Description: beta_CA_cladeB Location: 2095771-2096347 bp Feature: domain Description: beta_CA_cladeB Location: 2 095771-2 096347 bp Feature: gene Location: 2096907-2097407 bp Ori: QNR79577.1 Feature: domain Description: Zn_Tnp_IS91 Location: 2096979-2097252 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2 096979-2 0972 52 bp Feature: gene Location: 2097509-2098612 bp Ori: QNR79578.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2097572-2098253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 097572 -2 0982 53 bp Feature: gene Location: 2099136-2099804 bp Ori: QNR79579.1 Feature: domain Description: Tra5 Location: 2099295-2099772 bp Feature: domain Description: Tra5 Location: 2 0992 95-2 099772 bp Feature: gene Location: 2099982-2100254 bp Ori: QNR79580.1 Feature: domain Description: HTH_Tnp_1 Location: 2099991-2100195 bp Feature: domain Description: HTH_Tnp_1 Location: 2 099991-2 100195 bp Feature: gene Location: 2238340-2238495 bp Feature: gene Location: 2238654-2239055 bp Ori: QNR79696.1 Feature: domain Description: Zn_Tnp_IS91 Location: 2238666-2238900 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2 2 38666-2 2 38900 bp Feature: gene Location: 2239111-2239878 bp Ori: QNR82077.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2239117-2239474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 39117-2 2 39474 bp Feature: gene Location: 2240174-2240368 bp Feature: gene Location: 2240547-2241509 bp Ori: QNR79698.1 Feature: domain Description: MDR_like_2 Location: 2240550-2241489 bp Feature: domain Description: MDR_like_2 Location: 2 2 40550-2 2 41489 bp Feature: gene Location: 2333852-2333938 bp Feature: gene Location: 2333994-2334392 bp Ori: QNR79775.1 Feature: domain Description: Zn_Tnp_IS91 Location: 2334006-2334237 bp Feature: domain Description: Zn_Tnp_IS91 Location: 2 334006-2 3342 37 bp Feature: gene Location: 2334494-2335084 bp Ori: QNR79776.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2334515-2334725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 334515-2 33472 5 bp Feature: gene Location: 2335169-2335534 bp Ori: QNR79777.1 Feature: domain Description: HTH_Tnp_IS630 Location: 2335184-2335523 bp Feature: domain Description: HTH_Tnp_IS630 Location: 2 335184-2 33552 3 bp Feature: gene Location: 2335480-2336055 bp Ori: QNR82088.1 Feature: domain Description: DDE_3 Location: 2335585-2335978 bp Feature: domain Description: DDE_3 Location: 2 335585-2 335978 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_IS630 (pfam01710), RVT-GII, Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), InsE (COG2963), DDE_3 (pfam13358), PHA02517 (putative transposase OrfB; Reviewed), beta_CA_cladeB (cd00884), Tra5 (COG2801), HTH_Tnp_1 (pfam01527)
MDR_like_2 (cd05289)

Seq: CP061201.1 Piscirickettsia salmonis strain Ps12201A plasmid ps12201A.p1, complete sequence (129149 bp)
Overview 1 RT 1: 31149-34059 bp 2 RT 2: 77543-82936 bp 3 RT 3: 93350-97196 bp Neighborhood of RT #1 [31149, 34073] DDE_3 HTH_Tnp_IS630 RVT-GII Zn_Tnp_IS91 major_cap_HK97 Neighborhood of RT #2 [77543, 82959] Y2_Tnp Y2_Tnp RVT-GII PHA02517 RVT-GII InsE DDE_Tnp_IS240 Neighborhood of RT #3 [93350, 97426] HTH_Tnp_1 RVT-GII Y2_Tnp Feature: gene Location: 31149-31724 bp Ori: QNR82702.1 Feature: domain Description: DDE_3 Location: 31254-31647 bp Feature: domain Description: DDE_3 Location: 3 1254-3 1647 bp Feature: gene Location: 31670-32035 bp Ori: QNR82600.1 Feature: domain Description: HTH_Tnp_IS630 Location: 31685-32024 bp Feature: domain Description: HTH_Tnp_IS63 0 Location: 3 1685-3 2024 bp Feature: gene Location: 32135-32953 bp Ori: QNR82601.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32138-32792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 213 8-3 2792 bp Feature: gene Location: 33251-33649 bp Ori: QNR82602.1 Feature: domain Description: Zn_Tnp_IS91 Location: 33263-33494 bp Feature: domain Description: Zn_Tnp_IS91 Location: 3 3 263 -3 3 494 bp Feature: gene Location: 33783-34073 bp Ori: QNR82703.1 Feature: domain Description: major_cap_HK97 Location: 33798-34059 bp Feature: domain Description: major_cap_HK97 Location: 3 3 798-3 4059 bp Feature: gene Location: 77543-77875 bp Ori: QNR82655.1 Feature: domain Description: Y2_Tnp Location: 77561-77645 bp Feature: domain Description: Y2_Tnp Location: 77561-77645 bp Feature: gene Location: 78122-78646 bp Ori: QNR82656.1 Feature: domain Description: Y2_Tnp Location: 78209-78605 bp Feature: domain Description: Y2_Tnp Location: 78209-78605 bp Feature: gene Location: 79054-79467 bp Ori: QNR82657.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 79336-79435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 793 3 6-7943 5 bp Feature: gene Location: 79496-80392 bp Ori: QNR82658.1 Feature: domain Description: PHA02517 Location: 79700-80225 bp Feature: domain Description: PHA02517 Location: 79700-80225 bp Feature: gene Location: 80637-80927 bp Feature: gene Location: 80928-81338 bp Ori: QNR82706.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81006-81303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81006-813 03 bp Feature: gene Location: 81359-82511 bp Feature: domain Description: InsE Location: 81365-81647 bp Feature: domain Description: InsE Location: 813 65-81647 bp Feature: gene Location: 82543-82959 bp Feature: domain Description: DDE_Tnp_IS240 Location: 82549-82936 bp Feature: domain Description: DDE_Tnp_IS240 Location: 82549-8293 6 bp Feature: gene Location: 93350-93607 bp Feature: gene Location: 93676-94795 bp Feature: domain Description: HTH_Tnp_1 Location: 93679-93862 bp Feature: domain Description: HTH_Tnp_1 Location: 93 679-93 862 bp Feature: gene Location: 94889-95914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95171-95849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95171-95849 bp Feature: gene Location: 96111-96281 bp Feature: gene Location: 96611-97426 bp Ori: QNR82671.1 Feature: domain Description: Y2_Tnp Location: 96698-97196 bp Feature: domain Description: Y2_Tnp Location: 96698-97196 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), HTH_Tnp_IS630 (pfam01710), RVT-GII, Zn_Tnp_IS91 (pfam14319), major_cap_HK97 (TIGR01554), Y2_Tnp (pfam04986), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), DDE_Tnp_IS240 (pfam13610), HTH_Tnp_1 (pfam01527)