myRT

myRT report for GCA_014672695.1_ASM1467269v1

Download annotations/find similar RTs

Seq: CP053923.1 Defluviicoccus vanus strain Ben 114 chromosome, complete genome (4156012 bp)
Overview 1 RT 1: 1605392-1610566 bp 2 RT 2: 3508447-3515169 bp Neighborhood of RT #1 [1605392, 1611055] PIN_MT3492-like RVT-GII SRAP COG4544 PolY_like Neighborhood of RT #2 [3508447, 3515169] PAS_like Transposase_mut RVT-GII TIR_2 Feature: gene Location: 1605392-1605814 bp Ori: QNT69182.1 Feature: domain Description: PIN_MT3492-like Location: 1605401-1605803 bp Feature: domain Description: PIN_MT3492-like Location: 1 605401 -1 605803 bp Feature: gene Location: 1605898-1606248 bp Feature: gene Location: 1606273-1607766 bp Ori: QNT69184.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1606684-1607374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 606684-1 607374 bp Feature: gene Location: 1607934-1608644 bp Ori: QNT69185.1 Feature: domain Description: SRAP Location: 1607937-1608606 bp Feature: domain Description: SRAP Location: 1 607937-1 608606 bp Feature: gene Location: 1609222-1611055 bp Feature: domain Description: COG4544 Location: 1609225-1609540 bp Feature: domain Description: COG4544 Location: 1 609225-1 609540 bp Feature: domain Description: PolY_like Location: 1609621-1610566 bp Feature: domain Description: PolY_like Location: 1 609621 -1 61 0566 bp Feature: gene Location: 3508447-3510036 bp Ori: QNT71374.1 Feature: domain Description: PAS_like Location: 3508471-3509923 bp Feature: domain Description: PAS_like Location: 3508471 -3509923 bp Feature: gene Location: 3510387-3511595 bp Feature: domain Description: Transposase_mut Location: 3510414-3511500 bp Feature: domain Description: Transposase_mut Location: 351 041 4-351 1 500 bp Feature: gene Location: 3512145-3513563 bp Ori: QNT70569.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3512499-3513189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 2499-351 31 89 bp Feature: gene Location: 3513691-3514635 bp Ori: QNT70570.1 Feature: domain Description: TIR_2 Location: 3513703-3514024 bp Feature: domain Description: TIR_2 Location: 351 3703-351 4024 bp Feature: gene Location: 3514738-3515169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_MT3492-like (cd09874), RVT-GII, SRAP (pfam02586), COG4544 (Uncharacterized conserved protein ), PolY_like (cd03468), PAS_like (cd16025), Transposase_mut (pfam00872), TIR_2 (pfam13676)